Gene : Cagra.1629s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10139 - DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A Genomic Order:  10
Name:  ? Cagra.1629s0010 Secondary Identifier:  ? PAC:28912668
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0010 0.5kb upstream 0.5kb upstream 6637 true Scaffold1629: 33544-40180 Capsella grandiflora
Cagra.1629s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 33544-34043 Capsella grandiflora
Cagra.1629s0010 0.5kb downstream 0.5kb downstream 6637 true Scaffold1629: 34044-40680 Capsella grandiflora
Cagra.1629s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 40181-40680 Capsella grandiflora
Cagra.1629s0010 1.0kb upstream 1.0kb upstream 7137 true Scaffold1629: 33044-40180 Capsella grandiflora
Cagra.1629s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 33044-34043 Capsella grandiflora
Cagra.1629s0010 1.0kb downstream 1.0kb downstream 7137 true Scaffold1629: 34044-41180 Capsella grandiflora
Cagra.1629s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 40181-41180 Capsella grandiflora
Cagra.1629s0010 2.0kb upstream 2.0kb upstream 8137 true Scaffold1629: 32044-40180 Capsella grandiflora
Cagra.1629s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 32044-34043 Capsella grandiflora
Cagra.1629s0010 2.0kb downstream 2.0kb downstream 8137 true Scaffold1629: 34044-42180 Capsella grandiflora
Cagra.1629s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 40181-42180 Capsella grandiflora
Cagra.1629s0010 5.0kb upstream 5.0kb upstream 11137 true Scaffold1629: 29044-40180 Capsella grandiflora
Cagra.1629s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 29044-34043 Capsella grandiflora
Cagra.1629s0010 5.0kb downstream 5.0kb downstream 11137 true Scaffold1629: 34044-45180 Capsella grandiflora
Cagra.1629s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 40181-45180 Capsella grandiflora
Cagra.1629s0010 10.0kb upstream 10.0kb upstream 16137 true Scaffold1629: 24044-40180 Capsella grandiflora
Cagra.1629s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 24044-34043 Capsella grandiflora
Cagra.1629s0010 10.0kb downstream 10.0kb downstream 16137 true Scaffold1629: 34044-50180 Capsella grandiflora
Cagra.1629s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 40181-50180 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362848 5261 Brassicaceae View MSA
123831136 5264 Brassicales-Malvales View MSA
124338757 5266 SBM View MSA
124240535 5268 Malvidae View MSA
124066590 5270 Rosid View MSA
123740797 5271 Pentapetalae View MSA
122791229 5272 Eudicot View MSA
122042843 5273 Angiosperm View MSA
121346679 5274 Embryophyte View MSA
123424970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain