Gene : Cagra.1629s0029 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10353:SF46 - BETA-GLUCOSIDASE 41-RELATED Genomic Order:  29
Name:  ? Cagra.1629s0029 Secondary Identifier:  ? PAC:28912638
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5176 Capsella grandiflora pathologic  
Cgrandiflora PWY-7089 Capsella grandiflora pathologic  
Cgrandiflora PWY-7091 Capsella grandiflora pathologic  
Cgrandiflora PWY-7092 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0029 0.5kb upstream 0.5kb upstream 3105 true Scaffold1629: 159510-162614 Capsella grandiflora
Cagra.1629s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 162115-162614 Capsella grandiflora
Cagra.1629s0029 0.5kb downstream 0.5kb downstream 3105 true Scaffold1629: 159010-162114 Capsella grandiflora
Cagra.1629s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 159010-159509 Capsella grandiflora
Cagra.1629s0029 1.0kb upstream 1.0kb upstream 3605 true Scaffold1629: 159510-163114 Capsella grandiflora
Cagra.1629s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 162115-163114 Capsella grandiflora
Cagra.1629s0029 1.0kb downstream 1.0kb downstream 3605 true Scaffold1629: 158510-162114 Capsella grandiflora
Cagra.1629s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 158510-159509 Capsella grandiflora
Cagra.1629s0029 2.0kb upstream 2.0kb upstream 4605 true Scaffold1629: 159510-164114 Capsella grandiflora
Cagra.1629s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 162115-164114 Capsella grandiflora
Cagra.1629s0029 2.0kb downstream 2.0kb downstream 4605 true Scaffold1629: 157510-162114 Capsella grandiflora
Cagra.1629s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 157510-159509 Capsella grandiflora
Cagra.1629s0029 5.0kb upstream 5.0kb upstream 7605 true Scaffold1629: 159510-167114 Capsella grandiflora
Cagra.1629s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 162115-167114 Capsella grandiflora
Cagra.1629s0029 5.0kb downstream 5.0kb downstream 7605 true Scaffold1629: 154510-162114 Capsella grandiflora
Cagra.1629s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 154510-159509 Capsella grandiflora
Cagra.1629s0029 10.0kb upstream 10.0kb upstream 12605 true Scaffold1629: 159510-172114 Capsella grandiflora
Cagra.1629s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 162115-172114 Capsella grandiflora
Cagra.1629s0029 10.0kb downstream 10.0kb downstream 12605 true Scaffold1629: 149510-162114 Capsella grandiflora
Cagra.1629s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 149510-159509 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371689 5261 Brassicaceae View MSA
123829312 5264 Brassicales-Malvales View MSA
124340387 5266 SBM View MSA
124237656 5268 Malvidae View MSA
124063418 5270 Rosid View MSA
123738242 5271 Pentapetalae View MSA
122788523 5272 Eudicot View MSA
122050283 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain