Gene : Cagra.1629s0047 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  47
Name:  ? Cagra.1629s0047 Secondary Identifier:  ? PAC:28912639
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0047 0.5kb upstream 0.5kb upstream 2302 true Scaffold1629: 236406-238707 Capsella grandiflora
Cagra.1629s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 236406-236905 Capsella grandiflora
Cagra.1629s0047 0.5kb downstream 0.5kb downstream 2302 true Scaffold1629: 236906-239207 Capsella grandiflora
Cagra.1629s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 238708-239207 Capsella grandiflora
Cagra.1629s0047 1.0kb upstream 1.0kb upstream 2802 true Scaffold1629: 235906-238707 Capsella grandiflora
Cagra.1629s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 235906-236905 Capsella grandiflora
Cagra.1629s0047 1.0kb downstream 1.0kb downstream 2802 true Scaffold1629: 236906-239707 Capsella grandiflora
Cagra.1629s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 238708-239707 Capsella grandiflora
Cagra.1629s0047 2.0kb upstream 2.0kb upstream 3802 true Scaffold1629: 234906-238707 Capsella grandiflora
Cagra.1629s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 234906-236905 Capsella grandiflora
Cagra.1629s0047 2.0kb downstream 2.0kb downstream 3802 true Scaffold1629: 236906-240707 Capsella grandiflora
Cagra.1629s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 238708-240707 Capsella grandiflora
Cagra.1629s0047 5.0kb upstream 5.0kb upstream 6802 true Scaffold1629: 231906-238707 Capsella grandiflora
Cagra.1629s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 231906-236905 Capsella grandiflora
Cagra.1629s0047 5.0kb downstream 5.0kb downstream 6802 true Scaffold1629: 236906-243707 Capsella grandiflora
Cagra.1629s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 238708-243707 Capsella grandiflora
Cagra.1629s0047 10.0kb upstream 10.0kb upstream 11802 true Scaffold1629: 226906-238707 Capsella grandiflora
Cagra.1629s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 226906-236905 Capsella grandiflora
Cagra.1629s0047 10.0kb downstream 10.0kb downstream 11802 true Scaffold1629: 236906-248707 Capsella grandiflora
Cagra.1629s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 238708-248707 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364966 5261 Brassicaceae View MSA
123834812 5264 Brassicales-Malvales View MSA
124340970 5266 SBM View MSA
124238754 5268 Malvidae View MSA
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain