Gene : Cagra.1629s0050 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Genomic Order:  50
Name:  ? Cagra.1629s0050 Secondary Identifier:  ? PAC:28912671
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0050 0.5kb upstream 0.5kb upstream 4112 true Scaffold1629: 243854-247965 Capsella grandiflora
Cagra.1629s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 247466-247965 Capsella grandiflora
Cagra.1629s0050 0.5kb downstream 0.5kb downstream 4112 true Scaffold1629: 243354-247465 Capsella grandiflora
Cagra.1629s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 243354-243853 Capsella grandiflora
Cagra.1629s0050 1.0kb upstream 1.0kb upstream 4612 true Scaffold1629: 243854-248465 Capsella grandiflora
Cagra.1629s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 247466-248465 Capsella grandiflora
Cagra.1629s0050 1.0kb downstream 1.0kb downstream 4612 true Scaffold1629: 242854-247465 Capsella grandiflora
Cagra.1629s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 242854-243853 Capsella grandiflora
Cagra.1629s0050 2.0kb upstream 2.0kb upstream 5612 true Scaffold1629: 243854-249465 Capsella grandiflora
Cagra.1629s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 247466-249465 Capsella grandiflora
Cagra.1629s0050 2.0kb downstream 2.0kb downstream 5612 true Scaffold1629: 241854-247465 Capsella grandiflora
Cagra.1629s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 241854-243853 Capsella grandiflora
Cagra.1629s0050 5.0kb upstream 5.0kb upstream 8612 true Scaffold1629: 243854-252465 Capsella grandiflora
Cagra.1629s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 247466-252465 Capsella grandiflora
Cagra.1629s0050 5.0kb downstream 5.0kb downstream 8612 true Scaffold1629: 238854-247465 Capsella grandiflora
Cagra.1629s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 238854-243853 Capsella grandiflora
Cagra.1629s0050 10.0kb upstream 10.0kb upstream 13612 true Scaffold1629: 243854-257465 Capsella grandiflora
Cagra.1629s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 247466-257465 Capsella grandiflora
Cagra.1629s0050 10.0kb downstream 10.0kb downstream 13612 true Scaffold1629: 233854-247465 Capsella grandiflora
Cagra.1629s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 233854-243853 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375547 5261 Brassicaceae View MSA
123838028 5264 Brassicales-Malvales View MSA
124342242 5266 SBM View MSA
124253987 5268 Malvidae View MSA
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain