Gene : Cagra.1629s0056 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Genomic Order:  56
Name:  ? Cagra.1629s0056 Secondary Identifier:  ? PAC:28912692
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0056 0.5kb upstream 0.5kb upstream 2554 true Scaffold1629: 276558-279111 Capsella grandiflora
Cagra.1629s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 278612-279111 Capsella grandiflora
Cagra.1629s0056 0.5kb downstream 0.5kb downstream 2554 true Scaffold1629: 276058-278611 Capsella grandiflora
Cagra.1629s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 276058-276557 Capsella grandiflora
Cagra.1629s0056 1.0kb upstream 1.0kb upstream 3054 true Scaffold1629: 276558-279611 Capsella grandiflora
Cagra.1629s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 278612-279611 Capsella grandiflora
Cagra.1629s0056 1.0kb downstream 1.0kb downstream 3054 true Scaffold1629: 275558-278611 Capsella grandiflora
Cagra.1629s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 275558-276557 Capsella grandiflora
Cagra.1629s0056 2.0kb upstream 2.0kb upstream 4054 true Scaffold1629: 276558-280611 Capsella grandiflora
Cagra.1629s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 278612-280611 Capsella grandiflora
Cagra.1629s0056 2.0kb downstream 2.0kb downstream 4054 true Scaffold1629: 274558-278611 Capsella grandiflora
Cagra.1629s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 274558-276557 Capsella grandiflora
Cagra.1629s0056 5.0kb upstream 5.0kb upstream 7054 true Scaffold1629: 276558-283611 Capsella grandiflora
Cagra.1629s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 278612-283611 Capsella grandiflora
Cagra.1629s0056 5.0kb downstream 5.0kb downstream 7054 true Scaffold1629: 271558-278611 Capsella grandiflora
Cagra.1629s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 271558-276557 Capsella grandiflora
Cagra.1629s0056 10.0kb upstream 10.0kb upstream 12054 true Scaffold1629: 276558-288611 Capsella grandiflora
Cagra.1629s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 278612-288611 Capsella grandiflora
Cagra.1629s0056 10.0kb downstream 10.0kb downstream 12054 true Scaffold1629: 266558-278611 Capsella grandiflora
Cagra.1629s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 266558-276557 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
122364704 5261 Brassicaceae View MSA
123834787 5264 Brassicales-Malvales View MSA
124345636 5266 SBM View MSA
124238869 5268 Malvidae View MSA
124064316 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain