Gene : Cagra.1629s0066 C. grandiflora v1.1
Defline:  (1 of 1) PTHR34682:SF1 - AT HOOK MOTIF-CONTAINING PROTEIN Genomic Order:  66
Name:  ? Cagra.1629s0066 Secondary Identifier:  ? PAC:28912622
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0066 0.5kb upstream 0.5kb upstream 2377 true Scaffold1629: 306940-309316 Capsella grandiflora
Cagra.1629s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 308817-309316 Capsella grandiflora
Cagra.1629s0066 0.5kb downstream 0.5kb downstream 2377 true Scaffold1629: 306440-308816 Capsella grandiflora
Cagra.1629s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 306440-306939 Capsella grandiflora
Cagra.1629s0066 1.0kb upstream 1.0kb upstream 2877 true Scaffold1629: 306940-309816 Capsella grandiflora
Cagra.1629s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 308817-309816 Capsella grandiflora
Cagra.1629s0066 1.0kb downstream 1.0kb downstream 2877 true Scaffold1629: 305940-308816 Capsella grandiflora
Cagra.1629s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 305940-306939 Capsella grandiflora
Cagra.1629s0066 2.0kb upstream 2.0kb upstream 3877 true Scaffold1629: 306940-310816 Capsella grandiflora
Cagra.1629s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 308817-310816 Capsella grandiflora
Cagra.1629s0066 2.0kb downstream 2.0kb downstream 3877 true Scaffold1629: 304940-308816 Capsella grandiflora
Cagra.1629s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 304940-306939 Capsella grandiflora
Cagra.1629s0066 5.0kb upstream 5.0kb upstream 6877 true Scaffold1629: 306940-313816 Capsella grandiflora
Cagra.1629s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 308817-313816 Capsella grandiflora
Cagra.1629s0066 5.0kb downstream 5.0kb downstream 6877 true Scaffold1629: 301940-308816 Capsella grandiflora
Cagra.1629s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 301940-306939 Capsella grandiflora
Cagra.1629s0066 10.0kb upstream 10.0kb upstream 11877 true Scaffold1629: 306940-318816 Capsella grandiflora
Cagra.1629s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 308817-318816 Capsella grandiflora
Cagra.1629s0066 10.0kb downstream 10.0kb downstream 11877 true Scaffold1629: 296940-308816 Capsella grandiflora
Cagra.1629s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 296940-306939 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371506 5261 Brassicaceae View MSA
123800178 5264 Brassicales-Malvales View MSA
124297623 5266 SBM View MSA
124250567 5268 Malvidae View MSA
124060982 5270 Rosid View MSA
123743810 5271 Pentapetalae View MSA
122794319 5272 Eudicot View MSA
122045641 5273 Angiosperm View MSA
121350221 5274 Embryophyte View MSA
123381629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain