Gene : Cagra.1629s0078 C. grandiflora v1.1
Defline:  (1 of 2) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  78
Name:  ? Cagra.1629s0078 Secondary Identifier:  ? PAC:28912643
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5084 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0078 0.5kb upstream 0.5kb upstream 3952 true Scaffold1629: 348860-352811 Capsella grandiflora
Cagra.1629s0078 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 348860-349359 Capsella grandiflora
Cagra.1629s0078 0.5kb downstream 0.5kb downstream 3952 true Scaffold1629: 349360-353311 Capsella grandiflora
Cagra.1629s0078 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 352812-353311 Capsella grandiflora
Cagra.1629s0078 1.0kb upstream 1.0kb upstream 4452 true Scaffold1629: 348360-352811 Capsella grandiflora
Cagra.1629s0078 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 348360-349359 Capsella grandiflora
Cagra.1629s0078 1.0kb downstream 1.0kb downstream 4452 true Scaffold1629: 349360-353811 Capsella grandiflora
Cagra.1629s0078 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 352812-353811 Capsella grandiflora
Cagra.1629s0078 2.0kb upstream 2.0kb upstream 5452 true Scaffold1629: 347360-352811 Capsella grandiflora
Cagra.1629s0078 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 347360-349359 Capsella grandiflora
Cagra.1629s0078 2.0kb downstream 2.0kb downstream 5452 true Scaffold1629: 349360-354811 Capsella grandiflora
Cagra.1629s0078 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 352812-354811 Capsella grandiflora
Cagra.1629s0078 5.0kb upstream 5.0kb upstream 8452 true Scaffold1629: 344360-352811 Capsella grandiflora
Cagra.1629s0078 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 344360-349359 Capsella grandiflora
Cagra.1629s0078 5.0kb downstream 5.0kb downstream 8452 true Scaffold1629: 349360-357811 Capsella grandiflora
Cagra.1629s0078 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 352812-357811 Capsella grandiflora
Cagra.1629s0078 10.0kb upstream 10.0kb upstream 13452 true Scaffold1629: 339360-352811 Capsella grandiflora
Cagra.1629s0078 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 339360-349359 Capsella grandiflora
Cagra.1629s0078 10.0kb downstream 10.0kb downstream 13452 true Scaffold1629: 349360-362811 Capsella grandiflora
Cagra.1629s0078 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 352812-362811 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362639 5261 Brassicaceae View MSA
123838684 5264 Brassicales-Malvales View MSA
124343102 5266 SBM View MSA
124250651 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain