Gene : Cagra.1629s0081 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13161:SF15 - SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG Genomic Order:  81
Name:  ? Cagra.1629s0081 Secondary Identifier:  ? PAC:28912690
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0081 0.5kb upstream 0.5kb upstream 4197 true Scaffold1629: 363736-367932 Capsella grandiflora
Cagra.1629s0081 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 367433-367932 Capsella grandiflora
Cagra.1629s0081 0.5kb downstream 0.5kb downstream 4197 true Scaffold1629: 363236-367432 Capsella grandiflora
Cagra.1629s0081 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 363236-363735 Capsella grandiflora
Cagra.1629s0081 1.0kb upstream 1.0kb upstream 4697 true Scaffold1629: 363736-368432 Capsella grandiflora
Cagra.1629s0081 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 367433-368432 Capsella grandiflora
Cagra.1629s0081 1.0kb downstream 1.0kb downstream 4697 true Scaffold1629: 362736-367432 Capsella grandiflora
Cagra.1629s0081 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 362736-363735 Capsella grandiflora
Cagra.1629s0081 2.0kb upstream 2.0kb upstream 5697 true Scaffold1629: 363736-369432 Capsella grandiflora
Cagra.1629s0081 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 367433-369432 Capsella grandiflora
Cagra.1629s0081 2.0kb downstream 2.0kb downstream 5697 true Scaffold1629: 361736-367432 Capsella grandiflora
Cagra.1629s0081 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 361736-363735 Capsella grandiflora
Cagra.1629s0081 5.0kb upstream 5.0kb upstream 8697 true Scaffold1629: 363736-372432 Capsella grandiflora
Cagra.1629s0081 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 367433-372432 Capsella grandiflora
Cagra.1629s0081 5.0kb downstream 5.0kb downstream 8697 true Scaffold1629: 358736-367432 Capsella grandiflora
Cagra.1629s0081 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 358736-363735 Capsella grandiflora
Cagra.1629s0081 10.0kb upstream 10.0kb upstream 13697 true Scaffold1629: 363736-377432 Capsella grandiflora
Cagra.1629s0081 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 367433-377432 Capsella grandiflora
Cagra.1629s0081 10.0kb downstream 10.0kb downstream 13697 true Scaffold1629: 353736-367432 Capsella grandiflora
Cagra.1629s0081 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 353736-363735 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366999 5261 Brassicaceae View MSA
123838804 5264 Brassicales-Malvales View MSA
124336562 5266 SBM View MSA
124238921 5268 Malvidae View MSA
124061656 5270 Rosid View MSA
123739553 5271 Pentapetalae View MSA
122786719 5272 Eudicot View MSA
122047269 5273 Angiosperm View MSA
121346559 5274 Embryophyte View MSA
123424366 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain