Gene : Cagra.1629s0085 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10953//PTHR10953:SF160 - UBIQUITIN-ACTIVATING ENZYME E1 Genomic Order:  85
Name:  ? Cagra.1629s0085 Secondary Identifier:  ? PAC:28912627
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6823 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0085 0.5kb upstream 0.5kb upstream 3438 true Scaffold1629: 375654-379091 Capsella grandiflora
Cagra.1629s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 378592-379091 Capsella grandiflora
Cagra.1629s0085 0.5kb downstream 0.5kb downstream 3438 true Scaffold1629: 375154-378591 Capsella grandiflora
Cagra.1629s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 375154-375653 Capsella grandiflora
Cagra.1629s0085 1.0kb upstream 1.0kb upstream 3938 true Scaffold1629: 375654-379591 Capsella grandiflora
Cagra.1629s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 378592-379591 Capsella grandiflora
Cagra.1629s0085 1.0kb downstream 1.0kb downstream 3938 true Scaffold1629: 374654-378591 Capsella grandiflora
Cagra.1629s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 374654-375653 Capsella grandiflora
Cagra.1629s0085 2.0kb upstream 2.0kb upstream 4938 true Scaffold1629: 375654-380591 Capsella grandiflora
Cagra.1629s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 378592-380591 Capsella grandiflora
Cagra.1629s0085 2.0kb downstream 2.0kb downstream 4938 true Scaffold1629: 373654-378591 Capsella grandiflora
Cagra.1629s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 373654-375653 Capsella grandiflora
Cagra.1629s0085 5.0kb upstream 5.0kb upstream 7938 true Scaffold1629: 375654-383591 Capsella grandiflora
Cagra.1629s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 378592-383591 Capsella grandiflora
Cagra.1629s0085 5.0kb downstream 5.0kb downstream 7938 true Scaffold1629: 370654-378591 Capsella grandiflora
Cagra.1629s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 370654-375653 Capsella grandiflora
Cagra.1629s0085 10.0kb upstream 10.0kb upstream 12938 true Scaffold1629: 375654-388591 Capsella grandiflora
Cagra.1629s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 378592-388591 Capsella grandiflora
Cagra.1629s0085 10.0kb downstream 10.0kb downstream 12938 true Scaffold1629: 365654-378591 Capsella grandiflora
Cagra.1629s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 365654-375653 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371509 5261 Brassicaceae View MSA
123831885 5264 Brassicales-Malvales View MSA
124339346 5266 SBM View MSA
124243595 5268 Malvidae View MSA
124068766 5270 Rosid View MSA
123739748 5271 Pentapetalae View MSA
122789643 5272 Eudicot View MSA
122046718 5273 Angiosperm View MSA
123429008 5275 Viridiplantae View MSA
121346402 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain