Gene : Cagra.1629s0088 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15892 - MITOCHONDRIAL RIBOSOMAL PROTEIN L30 Genomic Order:  88
Name:  ? Cagra.1629s0088 Secondary Identifier:  ? PAC:28912641
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0088 0.5kb upstream 0.5kb upstream 1663 true Scaffold1629: 381215-382877 Capsella grandiflora
Cagra.1629s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 381215-381714 Capsella grandiflora
Cagra.1629s0088 0.5kb downstream 0.5kb downstream 1663 true Scaffold1629: 381715-383377 Capsella grandiflora
Cagra.1629s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 382878-383377 Capsella grandiflora
Cagra.1629s0088 1.0kb upstream 1.0kb upstream 2163 true Scaffold1629: 380715-382877 Capsella grandiflora
Cagra.1629s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 380715-381714 Capsella grandiflora
Cagra.1629s0088 1.0kb downstream 1.0kb downstream 2163 true Scaffold1629: 381715-383877 Capsella grandiflora
Cagra.1629s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 382878-383877 Capsella grandiflora
Cagra.1629s0088 2.0kb upstream 2.0kb upstream 3163 true Scaffold1629: 379715-382877 Capsella grandiflora
Cagra.1629s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 379715-381714 Capsella grandiflora
Cagra.1629s0088 2.0kb downstream 2.0kb downstream 3163 true Scaffold1629: 381715-384877 Capsella grandiflora
Cagra.1629s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 382878-384877 Capsella grandiflora
Cagra.1629s0088 5.0kb upstream 5.0kb upstream 6163 true Scaffold1629: 376715-382877 Capsella grandiflora
Cagra.1629s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 376715-381714 Capsella grandiflora
Cagra.1629s0088 5.0kb downstream 5.0kb downstream 6163 true Scaffold1629: 381715-387877 Capsella grandiflora
Cagra.1629s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 382878-387877 Capsella grandiflora
Cagra.1629s0088 10.0kb upstream 10.0kb upstream 11163 true Scaffold1629: 371715-382877 Capsella grandiflora
Cagra.1629s0088 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 371715-381714 Capsella grandiflora
Cagra.1629s0088 10.0kb downstream 10.0kb downstream 11163 true Scaffold1629: 381715-392877 Capsella grandiflora
Cagra.1629s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 382878-392877 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373763 5261 Brassicaceae View MSA
123840049 5264 Brassicales-Malvales View MSA
124346511 5266 SBM View MSA
124242805 5268 Malvidae View MSA
124064526 5270 Rosid View MSA
123748187 5271 Pentapetalae View MSA
122795469 5272 Eudicot View MSA
122041993 5273 Angiosperm View MSA
123429056 5275 Viridiplantae View MSA
121348158 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain