Gene : Cagra.1632s0012 C. grandiflora v1.1
Defline:  (1 of 2) PF01926//PF03144//PF11987 - 50S ribosome-binding GTPase (MMR_HSR1) // Elongation factor Tu domain 2 (GTP_EFTU_D2) // Translation-initiation factor 2 (IF-2) Genomic Order:  12
Name:  ? Cagra.1632s0012 Secondary Identifier:  ? PAC:28919444
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1632s0012 0.5kb upstream 0.5kb upstream 5054 true Scaffold1632: 46079-51132 Capsella grandiflora
Cagra.1632s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1632: 50633-51132 Capsella grandiflora
Cagra.1632s0012 0.5kb downstream 0.5kb downstream 5054 true Scaffold1632: 45579-50632 Capsella grandiflora
Cagra.1632s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1632: 45579-46078 Capsella grandiflora
Cagra.1632s0012 1.0kb upstream 1.0kb upstream 5554 true Scaffold1632: 46079-51632 Capsella grandiflora
Cagra.1632s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1632: 50633-51632 Capsella grandiflora
Cagra.1632s0012 1.0kb downstream 1.0kb downstream 5554 true Scaffold1632: 45079-50632 Capsella grandiflora
Cagra.1632s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1632: 45079-46078 Capsella grandiflora
Cagra.1632s0012 2.0kb upstream 2.0kb upstream 6554 true Scaffold1632: 46079-52632 Capsella grandiflora
Cagra.1632s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1632: 50633-52632 Capsella grandiflora
Cagra.1632s0012 2.0kb downstream 2.0kb downstream 6554 true Scaffold1632: 44079-50632 Capsella grandiflora
Cagra.1632s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1632: 44079-46078 Capsella grandiflora
Cagra.1632s0012 5.0kb upstream 5.0kb upstream 9554 true Scaffold1632: 46079-55632 Capsella grandiflora
Cagra.1632s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1632: 50633-55632 Capsella grandiflora
Cagra.1632s0012 5.0kb downstream 5.0kb downstream 9554 true Scaffold1632: 41079-50632 Capsella grandiflora
Cagra.1632s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1632: 41079-46078 Capsella grandiflora
Cagra.1632s0012 10.0kb upstream 10.0kb upstream 14554 true Scaffold1632: 46079-60632 Capsella grandiflora
Cagra.1632s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1632: 50633-60632 Capsella grandiflora
Cagra.1632s0012 10.0kb downstream 10.0kb downstream 14554 true Scaffold1632: 36079-50632 Capsella grandiflora
Cagra.1632s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1632: 36079-46078 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511889 5273 Angiosperm View MSA
122379368 5261 Brassicaceae View MSA
123802229 5264 Brassicales-Malvales View MSA
124299441 5266 SBM View MSA
124150855 5268 Malvidae View MSA
123876399 5270 Rosid View MSA
123460081 5271 Pentapetalae View MSA
122495460 5272 Eudicot View MSA
120784916 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain