Gene : Cagra.1618s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12064//PTHR12064:SF32 - ANCIENT CONSERVED DOMAIN PROTEIN-RELATED Genomic Order:  18
Name:  ? Cagra.1618s0018 Secondary Identifier:  ? PAC:28919815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1618s0018 0.5kb upstream 0.5kb upstream 3607 true Scaffold1618: 50358-53964 Capsella grandiflora
Cagra.1618s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold1618: 50358-50857 Capsella grandiflora
Cagra.1618s0018 0.5kb downstream 0.5kb downstream 3607 true Scaffold1618: 50858-54464 Capsella grandiflora
Cagra.1618s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold1618: 53965-54464 Capsella grandiflora
Cagra.1618s0018 1.0kb upstream 1.0kb upstream 4107 true Scaffold1618: 49858-53964 Capsella grandiflora
Cagra.1618s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold1618: 49858-50857 Capsella grandiflora
Cagra.1618s0018 1.0kb downstream 1.0kb downstream 4107 true Scaffold1618: 50858-54964 Capsella grandiflora
Cagra.1618s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold1618: 53965-54964 Capsella grandiflora
Cagra.1618s0018 2.0kb upstream 2.0kb upstream 5107 true Scaffold1618: 48858-53964 Capsella grandiflora
Cagra.1618s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold1618: 48858-50857 Capsella grandiflora
Cagra.1618s0018 2.0kb downstream 2.0kb downstream 5107 true Scaffold1618: 50858-55964 Capsella grandiflora
Cagra.1618s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold1618: 53965-55964 Capsella grandiflora
Cagra.1618s0018 5.0kb upstream 5.0kb upstream 8107 true Scaffold1618: 45858-53964 Capsella grandiflora
Cagra.1618s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold1618: 45858-50857 Capsella grandiflora
Cagra.1618s0018 5.0kb downstream 5.0kb downstream 8107 true Scaffold1618: 50858-58964 Capsella grandiflora
Cagra.1618s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold1618: 53965-58964 Capsella grandiflora
Cagra.1618s0018 10.0kb upstream 10.0kb upstream 13107 true Scaffold1618: 40858-53964 Capsella grandiflora
Cagra.1618s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold1618: 40858-50857 Capsella grandiflora
Cagra.1618s0018 10.0kb downstream 10.0kb downstream 8213 true Scaffold1618: 50858-59070 Capsella grandiflora
Cagra.1618s0018 10.0kb downstream 10.0kb downstream 5106 false Scaffold1618: 53965-59070 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041234 5273 Angiosperm View MSA
122370446 5261 Brassicaceae View MSA
123827994 5264 Brassicales-Malvales View MSA
124337658 5266 SBM View MSA
124237917 5268 Malvidae View MSA
124074702 5270 Rosid View MSA
123748953 5271 Pentapetalae View MSA
122797427 5272 Eudicot View MSA
121349289 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain