Gene : Cagra.1582s0009 C. grandiflora v1.1
Defline:  (1 of 4) 2.7.1.150 - 1-phosphatidylinositol-3-phosphate 5-kinase / Type III PIP kinase Genomic Order:  9
Name:  ? Cagra.1582s0009 Secondary Identifier:  ? PAC:28904842
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1582s0009 0.5kb upstream 0.5kb upstream 7543 true Scaffold1582: 37352-44894 Capsella grandiflora
Cagra.1582s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1582: 37352-37851 Capsella grandiflora
Cagra.1582s0009 0.5kb downstream 0.5kb downstream 7543 true Scaffold1582: 37852-45394 Capsella grandiflora
Cagra.1582s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1582: 44895-45394 Capsella grandiflora
Cagra.1582s0009 1.0kb upstream 1.0kb upstream 8043 true Scaffold1582: 36852-44894 Capsella grandiflora
Cagra.1582s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1582: 36852-37851 Capsella grandiflora
Cagra.1582s0009 1.0kb downstream 1.0kb downstream 8043 true Scaffold1582: 37852-45894 Capsella grandiflora
Cagra.1582s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1582: 44895-45894 Capsella grandiflora
Cagra.1582s0009 2.0kb upstream 2.0kb upstream 9043 true Scaffold1582: 35852-44894 Capsella grandiflora
Cagra.1582s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1582: 35852-37851 Capsella grandiflora
Cagra.1582s0009 2.0kb downstream 2.0kb downstream 9043 true Scaffold1582: 37852-46894 Capsella grandiflora
Cagra.1582s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1582: 44895-46894 Capsella grandiflora
Cagra.1582s0009 5.0kb upstream 5.0kb upstream 12043 true Scaffold1582: 32852-44894 Capsella grandiflora
Cagra.1582s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1582: 32852-37851 Capsella grandiflora
Cagra.1582s0009 5.0kb downstream 5.0kb downstream 12043 true Scaffold1582: 37852-49894 Capsella grandiflora
Cagra.1582s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1582: 44895-49894 Capsella grandiflora
Cagra.1582s0009 10.0kb upstream 10.0kb upstream 17043 true Scaffold1582: 27852-44894 Capsella grandiflora
Cagra.1582s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1582: 27852-37851 Capsella grandiflora
Cagra.1582s0009 10.0kb downstream 10.0kb downstream 17043 true Scaffold1582: 37852-54894 Capsella grandiflora
Cagra.1582s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1582: 44895-54894 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374885 5261 Brassicaceae View MSA
123833424 5264 Brassicales-Malvales View MSA
124343385 5266 SBM View MSA
124251287 5268 Malvidae View MSA
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain