Gene : Cagra.1582s0008 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31087:SF25 - PROTEIN LURP-ONE-RELATED 4 Genomic Order:  8
Name:  ? Cagra.1582s0008 Secondary Identifier:  ? PAC:28904843
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1582s0008 0.5kb upstream 0.5kb upstream 1315 true Scaffold1582: 32004-33318 Capsella grandiflora
Cagra.1582s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1582: 32819-33318 Capsella grandiflora
Cagra.1582s0008 0.5kb downstream 0.5kb downstream 1315 true Scaffold1582: 31504-32818 Capsella grandiflora
Cagra.1582s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1582: 31504-32003 Capsella grandiflora
Cagra.1582s0008 1.0kb upstream 1.0kb upstream 1815 true Scaffold1582: 32004-33818 Capsella grandiflora
Cagra.1582s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1582: 32819-33818 Capsella grandiflora
Cagra.1582s0008 1.0kb downstream 1.0kb downstream 1815 true Scaffold1582: 31004-32818 Capsella grandiflora
Cagra.1582s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1582: 31004-32003 Capsella grandiflora
Cagra.1582s0008 2.0kb upstream 2.0kb upstream 2815 true Scaffold1582: 32004-34818 Capsella grandiflora
Cagra.1582s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1582: 32819-34818 Capsella grandiflora
Cagra.1582s0008 2.0kb downstream 2.0kb downstream 2815 true Scaffold1582: 30004-32818 Capsella grandiflora
Cagra.1582s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1582: 30004-32003 Capsella grandiflora
Cagra.1582s0008 5.0kb upstream 5.0kb upstream 5815 true Scaffold1582: 32004-37818 Capsella grandiflora
Cagra.1582s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1582: 32819-37818 Capsella grandiflora
Cagra.1582s0008 5.0kb downstream 5.0kb downstream 5815 true Scaffold1582: 27004-32818 Capsella grandiflora
Cagra.1582s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1582: 27004-32003 Capsella grandiflora
Cagra.1582s0008 10.0kb upstream 10.0kb upstream 10815 true Scaffold1582: 32004-42818 Capsella grandiflora
Cagra.1582s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1582: 32819-42818 Capsella grandiflora
Cagra.1582s0008 10.0kb downstream 10.0kb downstream 10815 true Scaffold1582: 22004-32818 Capsella grandiflora
Cagra.1582s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1582: 22004-32003 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375109 5261 Brassicaceae View MSA
123840866 5264 Brassicales-Malvales View MSA
124341793 5266 SBM View MSA
124249743 5268 Malvidae View MSA
124063316 5270 Rosid View MSA
123746736 5271 Pentapetalae View MSA
122786164 5272 Eudicot View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain