Gene : Cagra.1582s0024 C. grandiflora v1.1
Defline:  (1 of 1) KOG1870//KOG1871 - Ubiquitin C-terminal hydrolase // Ubiquitin-specific protease Genomic Order:  24
Name:  ? Cagra.1582s0024 Secondary Identifier:  ? PAC:28904839
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1582s0024 0.5kb upstream 0.5kb upstream 4285 true Scaffold1582: 94988-99272 Capsella grandiflora
Cagra.1582s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold1582: 98773-99272 Capsella grandiflora
Cagra.1582s0024 0.5kb downstream 0.5kb downstream 4285 true Scaffold1582: 94488-98772 Capsella grandiflora
Cagra.1582s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold1582: 94488-94987 Capsella grandiflora
Cagra.1582s0024 1.0kb upstream 1.0kb upstream 4785 true Scaffold1582: 94988-99772 Capsella grandiflora
Cagra.1582s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold1582: 98773-99772 Capsella grandiflora
Cagra.1582s0024 1.0kb downstream 1.0kb downstream 4785 true Scaffold1582: 93988-98772 Capsella grandiflora
Cagra.1582s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold1582: 93988-94987 Capsella grandiflora
Cagra.1582s0024 2.0kb upstream 2.0kb upstream 5785 true Scaffold1582: 94988-100772 Capsella grandiflora
Cagra.1582s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold1582: 98773-100772 Capsella grandiflora
Cagra.1582s0024 2.0kb downstream 2.0kb downstream 5785 true Scaffold1582: 92988-98772 Capsella grandiflora
Cagra.1582s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold1582: 92988-94987 Capsella grandiflora
Cagra.1582s0024 5.0kb upstream 5.0kb upstream 8785 true Scaffold1582: 94988-103772 Capsella grandiflora
Cagra.1582s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold1582: 98773-103772 Capsella grandiflora
Cagra.1582s0024 5.0kb downstream 5.0kb downstream 8785 true Scaffold1582: 89988-98772 Capsella grandiflora
Cagra.1582s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold1582: 89988-94987 Capsella grandiflora
Cagra.1582s0024 10.0kb upstream 10.0kb upstream 13785 true Scaffold1582: 94988-108772 Capsella grandiflora
Cagra.1582s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold1582: 98773-108772 Capsella grandiflora
Cagra.1582s0024 10.0kb downstream 10.0kb downstream 13785 true Scaffold1582: 84988-98772 Capsella grandiflora
Cagra.1582s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold1582: 84988-94987 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369239 5261 Brassicaceae View MSA
123834365 5264 Brassicales-Malvales View MSA
124340030 5266 SBM View MSA
124254523 5268 Malvidae View MSA
124067125 5270 Rosid View MSA
123746951 5271 Pentapetalae View MSA
122790465 5272 Eudicot View MSA
122045970 5273 Angiosperm View MSA
121346163 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain