Gene : Cagra.1613s0002 C. grandiflora v1.1
Defline:  (1 of 7) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  2
Name:  ? Cagra.1613s0002 Secondary Identifier:  ? PAC:28917747
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1613s0002 0.5kb upstream 0.5kb upstream 1818 true Scaffold1613: 7597-9414 Capsella grandiflora
Cagra.1613s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1613: 7597-8096 Capsella grandiflora
Cagra.1613s0002 0.5kb downstream 0.5kb downstream 1818 true Scaffold1613: 8097-9914 Capsella grandiflora
Cagra.1613s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1613: 9415-9914 Capsella grandiflora
Cagra.1613s0002 1.0kb upstream 1.0kb upstream 2318 true Scaffold1613: 7097-9414 Capsella grandiflora
Cagra.1613s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1613: 7097-8096 Capsella grandiflora
Cagra.1613s0002 1.0kb downstream 1.0kb downstream 2318 true Scaffold1613: 8097-10414 Capsella grandiflora
Cagra.1613s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1613: 9415-10414 Capsella grandiflora
Cagra.1613s0002 2.0kb upstream 2.0kb upstream 3318 true Scaffold1613: 6097-9414 Capsella grandiflora
Cagra.1613s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1613: 6097-8096 Capsella grandiflora
Cagra.1613s0002 2.0kb downstream 2.0kb downstream 3318 true Scaffold1613: 8097-11414 Capsella grandiflora
Cagra.1613s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1613: 9415-11414 Capsella grandiflora
Cagra.1613s0002 5.0kb upstream 5.0kb upstream 6318 true Scaffold1613: 3097-9414 Capsella grandiflora
Cagra.1613s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1613: 3097-8096 Capsella grandiflora
Cagra.1613s0002 5.0kb downstream 5.0kb downstream 6318 true Scaffold1613: 8097-14414 Capsella grandiflora
Cagra.1613s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1613: 9415-14414 Capsella grandiflora
Cagra.1613s0002 10.0kb upstream 10.0kb upstream 9414 true Scaffold1613: 1-9414 Capsella grandiflora
Cagra.1613s0002 10.0kb upstream 10.0kb upstream 8096 false Scaffold1613: 1-8096 Capsella grandiflora
Cagra.1613s0002 10.0kb downstream 10.0kb downstream 11318 true Scaffold1613: 8097-19414 Capsella grandiflora
Cagra.1613s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1613: 9415-19414 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363911 5261 Brassicaceae View MSA
123839571 5264 Brassicales-Malvales View MSA
124337270 5266 SBM View MSA
124237049 5268 Malvidae View MSA
124068316 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain