Gene : Cagra.1613s0008 C. grandiflora v1.1
Defline:  (1 of 19) PTHR33920:SF1 - THIONIN-2.1-RELATED Genomic Order:  8
Name:  ? Cagra.1613s0008 Secondary Identifier:  ? PAC:28917744
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1613s0008 0.5kb upstream 0.5kb upstream 1086 true Scaffold1613: 36794-37879 Capsella grandiflora
Cagra.1613s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1613: 36794-37293 Capsella grandiflora
Cagra.1613s0008 0.5kb downstream 0.5kb downstream 1086 true Scaffold1613: 37294-38379 Capsella grandiflora
Cagra.1613s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1613: 37880-38379 Capsella grandiflora
Cagra.1613s0008 1.0kb upstream 1.0kb upstream 1586 true Scaffold1613: 36294-37879 Capsella grandiflora
Cagra.1613s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1613: 36294-37293 Capsella grandiflora
Cagra.1613s0008 1.0kb downstream 1.0kb downstream 1586 true Scaffold1613: 37294-38879 Capsella grandiflora
Cagra.1613s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1613: 37880-38879 Capsella grandiflora
Cagra.1613s0008 2.0kb upstream 2.0kb upstream 2586 true Scaffold1613: 35294-37879 Capsella grandiflora
Cagra.1613s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1613: 35294-37293 Capsella grandiflora
Cagra.1613s0008 2.0kb downstream 2.0kb downstream 2586 true Scaffold1613: 37294-39879 Capsella grandiflora
Cagra.1613s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1613: 37880-39879 Capsella grandiflora
Cagra.1613s0008 5.0kb upstream 5.0kb upstream 5586 true Scaffold1613: 32294-37879 Capsella grandiflora
Cagra.1613s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1613: 32294-37293 Capsella grandiflora
Cagra.1613s0008 5.0kb downstream 5.0kb downstream 5586 true Scaffold1613: 37294-42879 Capsella grandiflora
Cagra.1613s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1613: 37880-42879 Capsella grandiflora
Cagra.1613s0008 10.0kb upstream 10.0kb upstream 10586 true Scaffold1613: 27294-37879 Capsella grandiflora
Cagra.1613s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1613: 27294-37293 Capsella grandiflora
Cagra.1613s0008 10.0kb downstream 10.0kb downstream 10586 true Scaffold1613: 37294-47879 Capsella grandiflora
Cagra.1613s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1613: 37880-47879 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029035 5273 Angiosperm View MSA
122381499 5261 Brassicaceae View MSA
123803275 5264 Brassicales-Malvales View MSA
124300395 5266 SBM View MSA
124151585 5268 Malvidae View MSA
123876986 5270 Rosid View MSA
123460583 5271 Pentapetalae View MSA
122797481 5272 Eudicot View MSA
121298442 5274 Embryophyte View MSA
123336415 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain