Gene : Cagra.1561s0054 C. grandiflora v1.1
Defline:  (1 of 1) PTHR17490//PTHR17490:SF7 - SUA5 Genomic Order:  54
Name:  ? Cagra.1561s0054 Secondary Identifier:  ? PAC:28907434
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1561s0054 0.5kb upstream 0.5kb upstream 2235 true Scaffold1561: 189820-192054 Capsella grandiflora
Cagra.1561s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold1561: 189820-190319 Capsella grandiflora
Cagra.1561s0054 0.5kb downstream 0.5kb downstream 2235 true Scaffold1561: 190320-192554 Capsella grandiflora
Cagra.1561s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold1561: 192055-192554 Capsella grandiflora
Cagra.1561s0054 1.0kb upstream 1.0kb upstream 2735 true Scaffold1561: 189320-192054 Capsella grandiflora
Cagra.1561s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold1561: 189320-190319 Capsella grandiflora
Cagra.1561s0054 1.0kb downstream 1.0kb downstream 2735 true Scaffold1561: 190320-193054 Capsella grandiflora
Cagra.1561s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold1561: 192055-193054 Capsella grandiflora
Cagra.1561s0054 2.0kb upstream 2.0kb upstream 3735 true Scaffold1561: 188320-192054 Capsella grandiflora
Cagra.1561s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold1561: 188320-190319 Capsella grandiflora
Cagra.1561s0054 2.0kb downstream 2.0kb downstream 3735 true Scaffold1561: 190320-194054 Capsella grandiflora
Cagra.1561s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold1561: 192055-194054 Capsella grandiflora
Cagra.1561s0054 5.0kb upstream 5.0kb upstream 6735 true Scaffold1561: 185320-192054 Capsella grandiflora
Cagra.1561s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold1561: 185320-190319 Capsella grandiflora
Cagra.1561s0054 5.0kb downstream 5.0kb downstream 6735 true Scaffold1561: 190320-197054 Capsella grandiflora
Cagra.1561s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold1561: 192055-197054 Capsella grandiflora
Cagra.1561s0054 10.0kb upstream 10.0kb upstream 11735 true Scaffold1561: 180320-192054 Capsella grandiflora
Cagra.1561s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold1561: 180320-190319 Capsella grandiflora
Cagra.1561s0054 10.0kb downstream 10.0kb downstream 11735 true Scaffold1561: 190320-202054 Capsella grandiflora
Cagra.1561s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold1561: 192055-202054 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362930 5261 Brassicaceae View MSA
123831571 5264 Brassicales-Malvales View MSA
124338340 5266 SBM View MSA
124236875 5268 Malvidae View MSA
124060641 5270 Rosid View MSA
123737324 5271 Pentapetalae View MSA
122790315 5272 Eudicot View MSA
122043463 5273 Angiosperm View MSA
121345910 5274 Embryophyte View MSA
123425116 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain