Gene : Cagra.1561s0049 C. grandiflora v1.1
Genomic Order:  49 Name:  ? Cagra.1561s0049
Secondary Identifier:  ? PAC:28907418
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1561s0049 0.5kb upstream 0.5kb upstream 2575 true Scaffold1561: 176882-179456 Capsella grandiflora
Cagra.1561s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold1561: 176882-177381 Capsella grandiflora
Cagra.1561s0049 0.5kb downstream 0.5kb downstream 2575 true Scaffold1561: 177382-179956 Capsella grandiflora
Cagra.1561s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold1561: 179457-179956 Capsella grandiflora
Cagra.1561s0049 1.0kb upstream 1.0kb upstream 3075 true Scaffold1561: 176382-179456 Capsella grandiflora
Cagra.1561s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold1561: 176382-177381 Capsella grandiflora
Cagra.1561s0049 1.0kb downstream 1.0kb downstream 3075 true Scaffold1561: 177382-180456 Capsella grandiflora
Cagra.1561s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold1561: 179457-180456 Capsella grandiflora
Cagra.1561s0049 2.0kb upstream 2.0kb upstream 4075 true Scaffold1561: 175382-179456 Capsella grandiflora
Cagra.1561s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold1561: 175382-177381 Capsella grandiflora
Cagra.1561s0049 2.0kb downstream 2.0kb downstream 4075 true Scaffold1561: 177382-181456 Capsella grandiflora
Cagra.1561s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold1561: 179457-181456 Capsella grandiflora
Cagra.1561s0049 5.0kb upstream 5.0kb upstream 7075 true Scaffold1561: 172382-179456 Capsella grandiflora
Cagra.1561s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold1561: 172382-177381 Capsella grandiflora
Cagra.1561s0049 5.0kb downstream 5.0kb downstream 7075 true Scaffold1561: 177382-184456 Capsella grandiflora
Cagra.1561s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold1561: 179457-184456 Capsella grandiflora
Cagra.1561s0049 10.0kb upstream 10.0kb upstream 12075 true Scaffold1561: 167382-179456 Capsella grandiflora
Cagra.1561s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold1561: 167382-177381 Capsella grandiflora
Cagra.1561s0049 10.0kb downstream 10.0kb downstream 12075 true Scaffold1561: 177382-189456 Capsella grandiflora
Cagra.1561s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold1561: 179457-189456 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369759 5261 Brassicaceae View MSA
123838349 5264 Brassicales-Malvales View MSA
124337018 5266 SBM View MSA
124253196 5268 Malvidae View MSA
124073179 5270 Rosid View MSA
123752262 5271 Pentapetalae View MSA
122794539 5272 Eudicot View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain