Gene : Cagra.1562s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11630:SF43 - DNA REPLICATION LICENSING FACTOR MCM6 Genomic Order:  3
Name:  ? Cagra.1562s0003 Secondary Identifier:  ? PAC:28904655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0003 0.5kb upstream 0.5kb upstream 4951 true Scaffold1562: 7052-12002 Capsella grandiflora
Cagra.1562s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 11503-12002 Capsella grandiflora
Cagra.1562s0003 0.5kb downstream 0.5kb downstream 4951 true Scaffold1562: 6552-11502 Capsella grandiflora
Cagra.1562s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 6552-7051 Capsella grandiflora
Cagra.1562s0003 1.0kb upstream 1.0kb upstream 5451 true Scaffold1562: 7052-12502 Capsella grandiflora
Cagra.1562s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 11503-12502 Capsella grandiflora
Cagra.1562s0003 1.0kb downstream 1.0kb downstream 5451 true Scaffold1562: 6052-11502 Capsella grandiflora
Cagra.1562s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 6052-7051 Capsella grandiflora
Cagra.1562s0003 2.0kb upstream 2.0kb upstream 6451 true Scaffold1562: 7052-13502 Capsella grandiflora
Cagra.1562s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 11503-13502 Capsella grandiflora
Cagra.1562s0003 2.0kb downstream 2.0kb downstream 6451 true Scaffold1562: 5052-11502 Capsella grandiflora
Cagra.1562s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 5052-7051 Capsella grandiflora
Cagra.1562s0003 5.0kb upstream 5.0kb upstream 9451 true Scaffold1562: 7052-16502 Capsella grandiflora
Cagra.1562s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 11503-16502 Capsella grandiflora
Cagra.1562s0003 5.0kb downstream 5.0kb downstream 9451 true Scaffold1562: 2052-11502 Capsella grandiflora
Cagra.1562s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 2052-7051 Capsella grandiflora
Cagra.1562s0003 10.0kb upstream 10.0kb upstream 14451 true Scaffold1562: 7052-21502 Capsella grandiflora
Cagra.1562s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 11503-21502 Capsella grandiflora
Cagra.1562s0003 10.0kb downstream 10.0kb downstream 11502 true Scaffold1562: 1-11502 Capsella grandiflora
Cagra.1562s0003 10.0kb downstream 10.0kb downstream 7051 false Scaffold1562: 1-7051 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365457 5261 Brassicaceae View MSA
123833700 5264 Brassicales-Malvales View MSA
124340003 5266 SBM View MSA
124236837 5268 Malvidae View MSA
124066009 5270 Rosid View MSA
123737807 5271 Pentapetalae View MSA
122786757 5272 Eudicot View MSA
122044275 5273 Angiosperm View MSA
121345273 5274 Embryophyte View MSA
123424492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain