Gene : Cagra.1562s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR21461:SF12 - F21O3.9 PROTEIN-RELATED Genomic Order:  7
Name:  ? Cagra.1562s0007 Secondary Identifier:  ? PAC:28904641
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0007 0.5kb upstream 0.5kb upstream 2783 true Scaffold1562: 20605-23387 Capsella grandiflora
Cagra.1562s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 22888-23387 Capsella grandiflora
Cagra.1562s0007 0.5kb downstream 0.5kb downstream 2783 true Scaffold1562: 20105-22887 Capsella grandiflora
Cagra.1562s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 20105-20604 Capsella grandiflora
Cagra.1562s0007 1.0kb upstream 1.0kb upstream 3283 true Scaffold1562: 20605-23887 Capsella grandiflora
Cagra.1562s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 22888-23887 Capsella grandiflora
Cagra.1562s0007 1.0kb downstream 1.0kb downstream 3283 true Scaffold1562: 19605-22887 Capsella grandiflora
Cagra.1562s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 19605-20604 Capsella grandiflora
Cagra.1562s0007 2.0kb upstream 2.0kb upstream 4283 true Scaffold1562: 20605-24887 Capsella grandiflora
Cagra.1562s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 22888-24887 Capsella grandiflora
Cagra.1562s0007 2.0kb downstream 2.0kb downstream 4283 true Scaffold1562: 18605-22887 Capsella grandiflora
Cagra.1562s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 18605-20604 Capsella grandiflora
Cagra.1562s0007 5.0kb upstream 5.0kb upstream 7283 true Scaffold1562: 20605-27887 Capsella grandiflora
Cagra.1562s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 22888-27887 Capsella grandiflora
Cagra.1562s0007 5.0kb downstream 5.0kb downstream 7283 true Scaffold1562: 15605-22887 Capsella grandiflora
Cagra.1562s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 15605-20604 Capsella grandiflora
Cagra.1562s0007 10.0kb upstream 10.0kb upstream 12283 true Scaffold1562: 20605-32887 Capsella grandiflora
Cagra.1562s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 22888-32887 Capsella grandiflora
Cagra.1562s0007 10.0kb downstream 10.0kb downstream 12283 true Scaffold1562: 10605-22887 Capsella grandiflora
Cagra.1562s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 10605-20604 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369147 5261 Brassicaceae View MSA
123837077 5264 Brassicales-Malvales View MSA
124344324 5266 SBM View MSA
124244993 5268 Malvidae View MSA
124065457 5270 Rosid View MSA
123737464 5271 Pentapetalae View MSA
122793507 5272 Eudicot View MSA
122044541 5273 Angiosperm View MSA
121348152 5274 Embryophyte View MSA
123380747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain