Gene : Cagra.1562s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10799:SF725 - IMMUNOGLOBULIN E-SET DOMAIN-CONTAINING PROTEIN Genomic Order:  21
Name:  ? Cagra.1562s0021 Secondary Identifier:  ? PAC:28904618
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0021 0.5kb upstream 0.5kb upstream 11016 true Scaffold1562: 83627-94642 Capsella grandiflora
Cagra.1562s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 94143-94642 Capsella grandiflora
Cagra.1562s0021 0.5kb downstream 0.5kb downstream 11016 true Scaffold1562: 83127-94142 Capsella grandiflora
Cagra.1562s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 83127-83626 Capsella grandiflora
Cagra.1562s0021 1.0kb upstream 1.0kb upstream 11516 true Scaffold1562: 83627-95142 Capsella grandiflora
Cagra.1562s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 94143-95142 Capsella grandiflora
Cagra.1562s0021 1.0kb downstream 1.0kb downstream 11516 true Scaffold1562: 82627-94142 Capsella grandiflora
Cagra.1562s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 82627-83626 Capsella grandiflora
Cagra.1562s0021 2.0kb upstream 2.0kb upstream 12516 true Scaffold1562: 83627-96142 Capsella grandiflora
Cagra.1562s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 94143-96142 Capsella grandiflora
Cagra.1562s0021 2.0kb downstream 2.0kb downstream 12516 true Scaffold1562: 81627-94142 Capsella grandiflora
Cagra.1562s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 81627-83626 Capsella grandiflora
Cagra.1562s0021 5.0kb upstream 5.0kb upstream 15516 true Scaffold1562: 83627-99142 Capsella grandiflora
Cagra.1562s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 94143-99142 Capsella grandiflora
Cagra.1562s0021 5.0kb downstream 5.0kb downstream 15516 true Scaffold1562: 78627-94142 Capsella grandiflora
Cagra.1562s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 78627-83626 Capsella grandiflora
Cagra.1562s0021 10.0kb upstream 10.0kb upstream 20516 true Scaffold1562: 83627-104142 Capsella grandiflora
Cagra.1562s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 94143-104142 Capsella grandiflora
Cagra.1562s0021 10.0kb downstream 10.0kb downstream 20516 true Scaffold1562: 73627-94142 Capsella grandiflora
Cagra.1562s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 73627-83626 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366272 5261 Brassicaceae View MSA
123831424 5264 Brassicales-Malvales View MSA
124339682 5266 SBM View MSA
124242191 5268 Malvidae View MSA
124067092 5270 Rosid View MSA
123742521 5271 Pentapetalae View MSA
122789945 5272 Eudicot View MSA
122042077 5273 Angiosperm View MSA
121346690 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain