Gene : Cagra.1562s0031 C. grandiflora v1.1
Defline:  (1 of 26) PF07723//PF08387 - Leucine Rich Repeat (LRR_2) // FBD (FBD) Genomic Order:  31
Name:  ? Cagra.1562s0031 Secondary Identifier:  ? PAC:28904658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0031 0.5kb upstream 0.5kb upstream 2034 true Scaffold1562: 126226-128259 Capsella grandiflora
Cagra.1562s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 126226-126725 Capsella grandiflora
Cagra.1562s0031 0.5kb downstream 0.5kb downstream 2034 true Scaffold1562: 126726-128759 Capsella grandiflora
Cagra.1562s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 128260-128759 Capsella grandiflora
Cagra.1562s0031 1.0kb upstream 1.0kb upstream 2534 true Scaffold1562: 125726-128259 Capsella grandiflora
Cagra.1562s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 125726-126725 Capsella grandiflora
Cagra.1562s0031 1.0kb downstream 1.0kb downstream 2534 true Scaffold1562: 126726-129259 Capsella grandiflora
Cagra.1562s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 128260-129259 Capsella grandiflora
Cagra.1562s0031 2.0kb upstream 2.0kb upstream 3534 true Scaffold1562: 124726-128259 Capsella grandiflora
Cagra.1562s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 124726-126725 Capsella grandiflora
Cagra.1562s0031 2.0kb downstream 2.0kb downstream 3534 true Scaffold1562: 126726-130259 Capsella grandiflora
Cagra.1562s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 128260-130259 Capsella grandiflora
Cagra.1562s0031 5.0kb upstream 5.0kb upstream 6534 true Scaffold1562: 121726-128259 Capsella grandiflora
Cagra.1562s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 121726-126725 Capsella grandiflora
Cagra.1562s0031 5.0kb downstream 5.0kb downstream 6534 true Scaffold1562: 126726-133259 Capsella grandiflora
Cagra.1562s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 128260-133259 Capsella grandiflora
Cagra.1562s0031 10.0kb upstream 10.0kb upstream 11534 true Scaffold1562: 116726-128259 Capsella grandiflora
Cagra.1562s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 116726-126725 Capsella grandiflora
Cagra.1562s0031 10.0kb downstream 10.0kb downstream 11534 true Scaffold1562: 126726-138259 Capsella grandiflora
Cagra.1562s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 128260-138259 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343992 5261 Brassicaceae View MSA
123784062 5264 Brassicales-Malvales View MSA
124282262 5266 SBM View MSA
124136895 5268 Malvidae View MSA
123864679 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain