Gene : Cagra.1562s0036 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24095:SF177 - ACYL-ACTIVATING ENZYME 5, PEROXISOMAL-RELATED Genomic Order:  36
Name:  ? Cagra.1562s0036 Secondary Identifier:  ? PAC:28904650
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0036 0.5kb upstream 0.5kb upstream 2462 true Scaffold1562: 144240-146701 Capsella grandiflora
Cagra.1562s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 144240-144739 Capsella grandiflora
Cagra.1562s0036 0.5kb downstream 0.5kb downstream 2462 true Scaffold1562: 144740-147201 Capsella grandiflora
Cagra.1562s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 146702-147201 Capsella grandiflora
Cagra.1562s0036 1.0kb upstream 1.0kb upstream 2962 true Scaffold1562: 143740-146701 Capsella grandiflora
Cagra.1562s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 143740-144739 Capsella grandiflora
Cagra.1562s0036 1.0kb downstream 1.0kb downstream 2962 true Scaffold1562: 144740-147701 Capsella grandiflora
Cagra.1562s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 146702-147701 Capsella grandiflora
Cagra.1562s0036 2.0kb upstream 2.0kb upstream 3962 true Scaffold1562: 142740-146701 Capsella grandiflora
Cagra.1562s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 142740-144739 Capsella grandiflora
Cagra.1562s0036 2.0kb downstream 2.0kb downstream 3962 true Scaffold1562: 144740-148701 Capsella grandiflora
Cagra.1562s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 146702-148701 Capsella grandiflora
Cagra.1562s0036 5.0kb upstream 5.0kb upstream 6962 true Scaffold1562: 139740-146701 Capsella grandiflora
Cagra.1562s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 139740-144739 Capsella grandiflora
Cagra.1562s0036 5.0kb downstream 5.0kb downstream 6962 true Scaffold1562: 144740-151701 Capsella grandiflora
Cagra.1562s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 146702-151701 Capsella grandiflora
Cagra.1562s0036 10.0kb upstream 10.0kb upstream 11962 true Scaffold1562: 134740-146701 Capsella grandiflora
Cagra.1562s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 134740-144739 Capsella grandiflora
Cagra.1562s0036 10.0kb downstream 10.0kb downstream 11962 true Scaffold1562: 144740-156701 Capsella grandiflora
Cagra.1562s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 146702-156701 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121496130 5273 Angiosperm Singleton cluster - no MSA
122332702 5261 Brassicaceae Singleton cluster - no MSA
123773745 5264 Brassicales-Malvales Singleton cluster - no MSA
124272212 5266 SBM Singleton cluster - no MSA
124128076 5268 Malvidae Singleton cluster - no MSA
123856847 5270 Rosid Singleton cluster - no MSA
123442727 5271 Pentapetalae Singleton cluster - no MSA
122478300 5272 Eudicot Singleton cluster - no MSA
120769491 5274 Embryophyte Singleton cluster - no MSA
122811859 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain