Gene : Cagra.1562s0025 C. grandiflora v1.1
Defline:  (1 of 8) PTHR24015:SF419 - NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  25
Name:  ? Cagra.1562s0025 Secondary Identifier:  ? PAC:28904617
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0025 0.5kb upstream 0.5kb upstream 1720 true Scaffold1562: 108593-110312 Capsella grandiflora
Cagra.1562s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 109813-110312 Capsella grandiflora
Cagra.1562s0025 0.5kb downstream 0.5kb downstream 1720 true Scaffold1562: 108093-109812 Capsella grandiflora
Cagra.1562s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 108093-108592 Capsella grandiflora
Cagra.1562s0025 1.0kb upstream 1.0kb upstream 2220 true Scaffold1562: 108593-110812 Capsella grandiflora
Cagra.1562s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 109813-110812 Capsella grandiflora
Cagra.1562s0025 1.0kb downstream 1.0kb downstream 2220 true Scaffold1562: 107593-109812 Capsella grandiflora
Cagra.1562s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 107593-108592 Capsella grandiflora
Cagra.1562s0025 2.0kb upstream 2.0kb upstream 3220 true Scaffold1562: 108593-111812 Capsella grandiflora
Cagra.1562s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 109813-111812 Capsella grandiflora
Cagra.1562s0025 2.0kb downstream 2.0kb downstream 3220 true Scaffold1562: 106593-109812 Capsella grandiflora
Cagra.1562s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 106593-108592 Capsella grandiflora
Cagra.1562s0025 5.0kb upstream 5.0kb upstream 6220 true Scaffold1562: 108593-114812 Capsella grandiflora
Cagra.1562s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 109813-114812 Capsella grandiflora
Cagra.1562s0025 5.0kb downstream 5.0kb downstream 6220 true Scaffold1562: 103593-109812 Capsella grandiflora
Cagra.1562s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 103593-108592 Capsella grandiflora
Cagra.1562s0025 10.0kb upstream 10.0kb upstream 11220 true Scaffold1562: 108593-119812 Capsella grandiflora
Cagra.1562s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 109813-119812 Capsella grandiflora
Cagra.1562s0025 10.0kb downstream 10.0kb downstream 11220 true Scaffold1562: 98593-109812 Capsella grandiflora
Cagra.1562s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 98593-108592 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332698 5261 Brassicaceae Singleton cluster - no MSA
123842011 5264 Brassicales-Malvales View MSA
124351132 5266 SBM View MSA
124239087 5268 Malvidae View MSA
124072504 5270 Rosid View MSA
123743110 5271 Pentapetalae View MSA
122789265 5272 Eudicot View MSA
122042337 5273 Angiosperm View MSA
121347291 5274 Embryophyte View MSA
123428374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain