Gene : Cagra.1562s0042 C. grandiflora v1.1
Defline:  (1 of 1) PF00931//PF01582//PF03106//PF07725 - NB-ARC domain (NB-ARC) // TIR domain (TIR) // WRKY DNA -binding domain (WRKY) // Leucine Rich Repeat (LRR_3) Genomic Order:  42
Name:  ? Cagra.1562s0042 Secondary Identifier:  ? PAC:28904636
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0042 0.5kb upstream 0.5kb upstream 5292 true Scaffold1562: 163788-169079 Capsella grandiflora
Cagra.1562s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 168580-169079 Capsella grandiflora
Cagra.1562s0042 0.5kb downstream 0.5kb downstream 5292 true Scaffold1562: 163288-168579 Capsella grandiflora
Cagra.1562s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 163288-163787 Capsella grandiflora
Cagra.1562s0042 1.0kb upstream 1.0kb upstream 5792 true Scaffold1562: 163788-169579 Capsella grandiflora
Cagra.1562s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 168580-169579 Capsella grandiflora
Cagra.1562s0042 1.0kb downstream 1.0kb downstream 5792 true Scaffold1562: 162788-168579 Capsella grandiflora
Cagra.1562s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 162788-163787 Capsella grandiflora
Cagra.1562s0042 2.0kb upstream 2.0kb upstream 6792 true Scaffold1562: 163788-170579 Capsella grandiflora
Cagra.1562s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 168580-170579 Capsella grandiflora
Cagra.1562s0042 2.0kb downstream 2.0kb downstream 6792 true Scaffold1562: 161788-168579 Capsella grandiflora
Cagra.1562s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 161788-163787 Capsella grandiflora
Cagra.1562s0042 5.0kb upstream 5.0kb upstream 9792 true Scaffold1562: 163788-173579 Capsella grandiflora
Cagra.1562s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 168580-173579 Capsella grandiflora
Cagra.1562s0042 5.0kb downstream 5.0kb downstream 9792 true Scaffold1562: 158788-168579 Capsella grandiflora
Cagra.1562s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 158788-163787 Capsella grandiflora
Cagra.1562s0042 10.0kb upstream 10.0kb upstream 14792 true Scaffold1562: 163788-178579 Capsella grandiflora
Cagra.1562s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 168580-178579 Capsella grandiflora
Cagra.1562s0042 10.0kb downstream 10.0kb downstream 14792 true Scaffold1562: 153788-168579 Capsella grandiflora
Cagra.1562s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 153788-163787 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511441 5273 Angiosperm View MSA
122376235 5261 Brassicaceae View MSA
123801184 5264 Brassicales-Malvales View MSA
124298517 5266 SBM View MSA
124150142 5268 Malvidae View MSA
123875813 5270 Rosid View MSA
123459579 5271 Pentapetalae View MSA
122494969 5272 Eudicot View MSA
120784488 5274 Embryophyte View MSA
122826398 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain