Gene : Cagra.1562s0040 C. grandiflora v1.1
Defline:  (1 of 71) PTHR32212:SF126 - EMB Genomic Order:  40
Name:  ? Cagra.1562s0040 Secondary Identifier:  ? PAC:28904610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0040 0.5kb upstream 0.5kb upstream 2031 true Scaffold1562: 158142-160172 Capsella grandiflora
Cagra.1562s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 158142-158641 Capsella grandiflora
Cagra.1562s0040 0.5kb downstream 0.5kb downstream 2031 true Scaffold1562: 158642-160672 Capsella grandiflora
Cagra.1562s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 160173-160672 Capsella grandiflora
Cagra.1562s0040 1.0kb upstream 1.0kb upstream 2531 true Scaffold1562: 157642-160172 Capsella grandiflora
Cagra.1562s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 157642-158641 Capsella grandiflora
Cagra.1562s0040 1.0kb downstream 1.0kb downstream 2531 true Scaffold1562: 158642-161172 Capsella grandiflora
Cagra.1562s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 160173-161172 Capsella grandiflora
Cagra.1562s0040 2.0kb upstream 2.0kb upstream 3531 true Scaffold1562: 156642-160172 Capsella grandiflora
Cagra.1562s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 156642-158641 Capsella grandiflora
Cagra.1562s0040 2.0kb downstream 2.0kb downstream 3531 true Scaffold1562: 158642-162172 Capsella grandiflora
Cagra.1562s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 160173-162172 Capsella grandiflora
Cagra.1562s0040 5.0kb upstream 5.0kb upstream 6531 true Scaffold1562: 153642-160172 Capsella grandiflora
Cagra.1562s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 153642-158641 Capsella grandiflora
Cagra.1562s0040 5.0kb downstream 5.0kb downstream 6531 true Scaffold1562: 158642-165172 Capsella grandiflora
Cagra.1562s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 160173-165172 Capsella grandiflora
Cagra.1562s0040 10.0kb upstream 10.0kb upstream 11531 true Scaffold1562: 148642-160172 Capsella grandiflora
Cagra.1562s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 148642-158641 Capsella grandiflora
Cagra.1562s0040 10.0kb downstream 10.0kb downstream 11531 true Scaffold1562: 158642-170172 Capsella grandiflora
Cagra.1562s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 160173-170172 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499140 5273 Angiosperm View MSA
122337672 5261 Brassicaceae View MSA
123778311 5264 Brassicales-Malvales View MSA
124276660 5266 SBM View MSA
124131927 5268 Malvidae View MSA
123860272 5270 Rosid View MSA
123445895 5271 Pentapetalae View MSA
122481450 5272 Eudicot View MSA
120772482 5274 Embryophyte View MSA
122814826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain