Gene : Cagra.1569s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR13878//PTHR13878:SF14 - GULONOLACTONE OXIDASE Genomic Order:  5
Name:  ? Cagra.1569s0005 Secondary Identifier:  ? PAC:28913454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1569s0005 0.5kb upstream 0.5kb upstream 1962 true Scaffold1569: 18477-20438 Capsella grandiflora
Cagra.1569s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1569: 19939-20438 Capsella grandiflora
Cagra.1569s0005 0.5kb downstream 0.5kb downstream 1962 true Scaffold1569: 17977-19938 Capsella grandiflora
Cagra.1569s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1569: 17977-18476 Capsella grandiflora
Cagra.1569s0005 1.0kb upstream 1.0kb upstream 2462 true Scaffold1569: 18477-20938 Capsella grandiflora
Cagra.1569s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1569: 19939-20938 Capsella grandiflora
Cagra.1569s0005 1.0kb downstream 1.0kb downstream 2462 true Scaffold1569: 17477-19938 Capsella grandiflora
Cagra.1569s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1569: 17477-18476 Capsella grandiflora
Cagra.1569s0005 2.0kb upstream 2.0kb upstream 3462 true Scaffold1569: 18477-21938 Capsella grandiflora
Cagra.1569s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1569: 19939-21938 Capsella grandiflora
Cagra.1569s0005 2.0kb downstream 2.0kb downstream 3462 true Scaffold1569: 16477-19938 Capsella grandiflora
Cagra.1569s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1569: 16477-18476 Capsella grandiflora
Cagra.1569s0005 5.0kb upstream 5.0kb upstream 6462 true Scaffold1569: 18477-24938 Capsella grandiflora
Cagra.1569s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1569: 19939-24938 Capsella grandiflora
Cagra.1569s0005 5.0kb downstream 5.0kb downstream 6462 true Scaffold1569: 13477-19938 Capsella grandiflora
Cagra.1569s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1569: 13477-18476 Capsella grandiflora
Cagra.1569s0005 10.0kb upstream 10.0kb upstream 11462 true Scaffold1569: 18477-29938 Capsella grandiflora
Cagra.1569s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1569: 19939-29938 Capsella grandiflora
Cagra.1569s0005 10.0kb downstream 10.0kb downstream 11462 true Scaffold1569: 8477-19938 Capsella grandiflora
Cagra.1569s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1569: 8477-18476 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332704 5261 Brassicaceae Singleton cluster - no MSA
123773747 5264 Brassicales-Malvales Singleton cluster - no MSA
124272214 5266 SBM Singleton cluster - no MSA
124250098 5268 Malvidae View MSA
124067261 5270 Rosid View MSA
123742182 5271 Pentapetalae View MSA
122770229 5272 Eudicot View MSA
122051294 5273 Angiosperm View MSA
121312401 5274 Embryophyte View MSA
123349577 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain