Gene : Cagra.1569s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12919:SF20 - 28S RIBOSOMAL PROTEIN S16, MITOCHONDRIAL Genomic Order:  2
Name:  ? Cagra.1569s0002 Secondary Identifier:  ? PAC:28913456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1569s0002 0.5kb upstream 0.5kb upstream 2052 true Scaffold1569: 2857-4908 Capsella grandiflora
Cagra.1569s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1569: 2857-3356 Capsella grandiflora
Cagra.1569s0002 0.5kb downstream 0.5kb downstream 2052 true Scaffold1569: 3357-5408 Capsella grandiflora
Cagra.1569s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1569: 4909-5408 Capsella grandiflora
Cagra.1569s0002 1.0kb upstream 1.0kb upstream 2552 true Scaffold1569: 2357-4908 Capsella grandiflora
Cagra.1569s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1569: 2357-3356 Capsella grandiflora
Cagra.1569s0002 1.0kb downstream 1.0kb downstream 2552 true Scaffold1569: 3357-5908 Capsella grandiflora
Cagra.1569s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1569: 4909-5908 Capsella grandiflora
Cagra.1569s0002 2.0kb upstream 2.0kb upstream 3552 true Scaffold1569: 1357-4908 Capsella grandiflora
Cagra.1569s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1569: 1357-3356 Capsella grandiflora
Cagra.1569s0002 2.0kb downstream 2.0kb downstream 3552 true Scaffold1569: 3357-6908 Capsella grandiflora
Cagra.1569s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1569: 4909-6908 Capsella grandiflora
Cagra.1569s0002 5.0kb upstream 5.0kb upstream 4908 true Scaffold1569: 1-4908 Capsella grandiflora
Cagra.1569s0002 5.0kb upstream 5.0kb upstream 3356 false Scaffold1569: 1-3356 Capsella grandiflora
Cagra.1569s0002 5.0kb downstream 5.0kb downstream 6552 true Scaffold1569: 3357-9908 Capsella grandiflora
Cagra.1569s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1569: 4909-9908 Capsella grandiflora
Cagra.1569s0002 10.0kb upstream 10.0kb upstream 4908 true Scaffold1569: 1-4908 Capsella grandiflora
Cagra.1569s0002 10.0kb upstream 10.0kb upstream 3356 false Scaffold1569: 1-3356 Capsella grandiflora
Cagra.1569s0002 10.0kb downstream 10.0kb downstream 11552 true Scaffold1569: 3357-14908 Capsella grandiflora
Cagra.1569s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1569: 4909-14908 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380268 5261 Brassicaceae View MSA
123831449 5264 Brassicales-Malvales View MSA
124336720 5266 SBM View MSA
124241934 5268 Malvidae View MSA
124065829 5270 Rosid View MSA
123738502 5271 Pentapetalae View MSA
122792819 5272 Eudicot View MSA
122051162 5273 Angiosperm View MSA
121348917 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain