Gene : Cagra.1535s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33432:SF3 - EMSY N TERMINUS AND PLANT TUDOR-LIKE DOMAIN-CONTAINING PROTEIN Genomic Order:  5
Name:  ? Cagra.1535s0005 Secondary Identifier:  ? PAC:28896710
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1535s0005 0.5kb upstream 0.5kb upstream 4187 true Scaffold1535: 17842-22028 Capsella grandiflora
Cagra.1535s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1535: 17842-18341 Capsella grandiflora
Cagra.1535s0005 0.5kb downstream 0.5kb downstream 4187 true Scaffold1535: 18342-22528 Capsella grandiflora
Cagra.1535s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1535: 22029-22528 Capsella grandiflora
Cagra.1535s0005 1.0kb upstream 1.0kb upstream 4687 true Scaffold1535: 17342-22028 Capsella grandiflora
Cagra.1535s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1535: 17342-18341 Capsella grandiflora
Cagra.1535s0005 1.0kb downstream 1.0kb downstream 4687 true Scaffold1535: 18342-23028 Capsella grandiflora
Cagra.1535s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1535: 22029-23028 Capsella grandiflora
Cagra.1535s0005 2.0kb upstream 2.0kb upstream 5687 true Scaffold1535: 16342-22028 Capsella grandiflora
Cagra.1535s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1535: 16342-18341 Capsella grandiflora
Cagra.1535s0005 2.0kb downstream 2.0kb downstream 5687 true Scaffold1535: 18342-24028 Capsella grandiflora
Cagra.1535s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1535: 22029-24028 Capsella grandiflora
Cagra.1535s0005 5.0kb upstream 5.0kb upstream 8687 true Scaffold1535: 13342-22028 Capsella grandiflora
Cagra.1535s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1535: 13342-18341 Capsella grandiflora
Cagra.1535s0005 5.0kb downstream 5.0kb downstream 8687 true Scaffold1535: 18342-27028 Capsella grandiflora
Cagra.1535s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1535: 22029-27028 Capsella grandiflora
Cagra.1535s0005 10.0kb upstream 10.0kb upstream 13687 true Scaffold1535: 8342-22028 Capsella grandiflora
Cagra.1535s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1535: 8342-18341 Capsella grandiflora
Cagra.1535s0005 10.0kb downstream 10.0kb downstream 13687 true Scaffold1535: 18342-32028 Capsella grandiflora
Cagra.1535s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1535: 22029-32028 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363597 5261 Brassicaceae View MSA
123831865 5264 Brassicales-Malvales View MSA
124350337 5266 SBM View MSA
124242542 5268 Malvidae View MSA
124070696 5270 Rosid View MSA
123751368 5271 Pentapetalae View MSA
122797333 5272 Eudicot View MSA
122041538 5273 Angiosperm View MSA
121351011 5274 Embryophyte View MSA
123428685 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain