Gene : Cagra.1533s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10641:SF588 - TRANSCRIPTION REPRESSOR MYB4 Genomic Order:  5
Name:  ? Cagra.1533s0005 Secondary Identifier:  ? PAC:28912305
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1533s0005 0.5kb upstream 0.5kb upstream 1704 true Scaffold1533: 14705-16408 Capsella grandiflora
Cagra.1533s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1533: 15909-16408 Capsella grandiflora
Cagra.1533s0005 0.5kb downstream 0.5kb downstream 1704 true Scaffold1533: 14205-15908 Capsella grandiflora
Cagra.1533s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1533: 14205-14704 Capsella grandiflora
Cagra.1533s0005 1.0kb upstream 1.0kb upstream 2204 true Scaffold1533: 14705-16908 Capsella grandiflora
Cagra.1533s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1533: 15909-16908 Capsella grandiflora
Cagra.1533s0005 1.0kb downstream 1.0kb downstream 2204 true Scaffold1533: 13705-15908 Capsella grandiflora
Cagra.1533s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1533: 13705-14704 Capsella grandiflora
Cagra.1533s0005 2.0kb upstream 2.0kb upstream 3204 true Scaffold1533: 14705-17908 Capsella grandiflora
Cagra.1533s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1533: 15909-17908 Capsella grandiflora
Cagra.1533s0005 2.0kb downstream 2.0kb downstream 3204 true Scaffold1533: 12705-15908 Capsella grandiflora
Cagra.1533s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1533: 12705-14704 Capsella grandiflora
Cagra.1533s0005 5.0kb upstream 5.0kb upstream 6204 true Scaffold1533: 14705-20908 Capsella grandiflora
Cagra.1533s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1533: 15909-20908 Capsella grandiflora
Cagra.1533s0005 5.0kb downstream 5.0kb downstream 6204 true Scaffold1533: 9705-15908 Capsella grandiflora
Cagra.1533s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1533: 9705-14704 Capsella grandiflora
Cagra.1533s0005 10.0kb upstream 10.0kb upstream 11204 true Scaffold1533: 14705-25908 Capsella grandiflora
Cagra.1533s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1533: 15909-25908 Capsella grandiflora
Cagra.1533s0005 10.0kb downstream 10.0kb downstream 11204 true Scaffold1533: 4705-15908 Capsella grandiflora
Cagra.1533s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1533: 4705-14704 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364776 5261 Brassicaceae View MSA
123798825 5264 Brassicales-Malvales View MSA
124296410 5266 SBM View MSA
124148572 5268 Malvidae View MSA
124067546 5270 Rosid View MSA
123750184 5271 Pentapetalae View MSA
122796704 5272 Eudicot View MSA
122049287 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain