Gene : Cagra.1536s0005 C. grandiflora v1.1
Genomic Order:  5 Name:  ? Cagra.1536s0005
Secondary Identifier:  ? PAC:28894651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1536s0005 0.5kb upstream 0.5kb upstream 2708 true Scaffold1536: 23544-26251 Capsella grandiflora
Cagra.1536s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1536: 23544-24043 Capsella grandiflora
Cagra.1536s0005 0.5kb downstream 0.5kb downstream 2708 true Scaffold1536: 24044-26751 Capsella grandiflora
Cagra.1536s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1536: 26252-26751 Capsella grandiflora
Cagra.1536s0005 1.0kb upstream 1.0kb upstream 3208 true Scaffold1536: 23044-26251 Capsella grandiflora
Cagra.1536s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1536: 23044-24043 Capsella grandiflora
Cagra.1536s0005 1.0kb downstream 1.0kb downstream 3208 true Scaffold1536: 24044-27251 Capsella grandiflora
Cagra.1536s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1536: 26252-27251 Capsella grandiflora
Cagra.1536s0005 2.0kb upstream 2.0kb upstream 4208 true Scaffold1536: 22044-26251 Capsella grandiflora
Cagra.1536s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1536: 22044-24043 Capsella grandiflora
Cagra.1536s0005 2.0kb downstream 2.0kb downstream 4208 true Scaffold1536: 24044-28251 Capsella grandiflora
Cagra.1536s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1536: 26252-28251 Capsella grandiflora
Cagra.1536s0005 5.0kb upstream 5.0kb upstream 7208 true Scaffold1536: 19044-26251 Capsella grandiflora
Cagra.1536s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1536: 19044-24043 Capsella grandiflora
Cagra.1536s0005 5.0kb downstream 5.0kb downstream 7208 true Scaffold1536: 24044-31251 Capsella grandiflora
Cagra.1536s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1536: 26252-31251 Capsella grandiflora
Cagra.1536s0005 10.0kb upstream 10.0kb upstream 12208 true Scaffold1536: 14044-26251 Capsella grandiflora
Cagra.1536s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1536: 14044-24043 Capsella grandiflora
Cagra.1536s0005 10.0kb downstream 10.0kb downstream 12208 true Scaffold1536: 24044-36251 Capsella grandiflora
Cagra.1536s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1536: 26252-36251 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360327 5261 Brassicaceae View MSA
123839494 5264 Brassicales-Malvales View MSA
124336555 5266 SBM View MSA
124241118 5268 Malvidae View MSA
124061799 5270 Rosid View MSA
123736640 5271 Pentapetalae View MSA
122769869 5272 Eudicot View MSA
122044145 5273 Angiosperm View MSA
121346364 5274 Embryophyte View MSA
123428610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain