Gene : Cagra.1549s0007 C. grandiflora v1.1
Genomic Order:  7 Name:  ? Cagra.1549s0007
Secondary Identifier:  ? PAC:28918722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1549s0007 0.5kb upstream 0.5kb upstream 2735 true Scaffold1549: 27551-30285 Capsella grandiflora
Cagra.1549s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1549: 27551-28050 Capsella grandiflora
Cagra.1549s0007 0.5kb downstream 0.5kb downstream 2735 true Scaffold1549: 28051-30785 Capsella grandiflora
Cagra.1549s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1549: 30286-30785 Capsella grandiflora
Cagra.1549s0007 1.0kb upstream 1.0kb upstream 3235 true Scaffold1549: 27051-30285 Capsella grandiflora
Cagra.1549s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1549: 27051-28050 Capsella grandiflora
Cagra.1549s0007 1.0kb downstream 1.0kb downstream 3235 true Scaffold1549: 28051-31285 Capsella grandiflora
Cagra.1549s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1549: 30286-31285 Capsella grandiflora
Cagra.1549s0007 2.0kb upstream 2.0kb upstream 4235 true Scaffold1549: 26051-30285 Capsella grandiflora
Cagra.1549s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1549: 26051-28050 Capsella grandiflora
Cagra.1549s0007 2.0kb downstream 2.0kb downstream 4235 true Scaffold1549: 28051-32285 Capsella grandiflora
Cagra.1549s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1549: 30286-32285 Capsella grandiflora
Cagra.1549s0007 5.0kb upstream 5.0kb upstream 7235 true Scaffold1549: 23051-30285 Capsella grandiflora
Cagra.1549s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1549: 23051-28050 Capsella grandiflora
Cagra.1549s0007 5.0kb downstream 5.0kb downstream 4984 true Scaffold1549: 28051-33034 Capsella grandiflora
Cagra.1549s0007 5.0kb downstream 5.0kb downstream 2749 false Scaffold1549: 30286-33034 Capsella grandiflora
Cagra.1549s0007 10.0kb upstream 10.0kb upstream 12235 true Scaffold1549: 18051-30285 Capsella grandiflora
Cagra.1549s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1549: 18051-28050 Capsella grandiflora
Cagra.1549s0007 10.0kb downstream 10.0kb downstream 4984 true Scaffold1549: 28051-33034 Capsella grandiflora
Cagra.1549s0007 10.0kb downstream 10.0kb downstream 2749 false Scaffold1549: 30286-33034 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124148697 5268 Malvidae View MSA
122365739 5261 Brassicaceae View MSA
123799028 5264 Brassicales-Malvales View MSA
124296592 5266 SBM View MSA
124050535 5270 Rosid View MSA
123740345 5271 Pentapetalae View MSA
122790196 5272 Eudicot View MSA
122045175 5273 Angiosperm View MSA
121351591 5274 Embryophyte View MSA
123427027 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain