Gene : Cagra.1561s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31846:SF12 - RNA-BINDING PROTEIN YHBY Genomic Order:  4
Name:  ? Cagra.1561s0004 Secondary Identifier:  ? PAC:28907414
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1561s0004 0.5kb upstream 0.5kb upstream 5244 true Scaffold1561: 11240-16483 Capsella grandiflora
Cagra.1561s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1561: 11240-11739 Capsella grandiflora
Cagra.1561s0004 0.5kb downstream 0.5kb downstream 5244 true Scaffold1561: 11740-16983 Capsella grandiflora
Cagra.1561s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1561: 16484-16983 Capsella grandiflora
Cagra.1561s0004 1.0kb upstream 1.0kb upstream 5744 true Scaffold1561: 10740-16483 Capsella grandiflora
Cagra.1561s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1561: 10740-11739 Capsella grandiflora
Cagra.1561s0004 1.0kb downstream 1.0kb downstream 5744 true Scaffold1561: 11740-17483 Capsella grandiflora
Cagra.1561s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1561: 16484-17483 Capsella grandiflora
Cagra.1561s0004 2.0kb upstream 2.0kb upstream 6744 true Scaffold1561: 9740-16483 Capsella grandiflora
Cagra.1561s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1561: 9740-11739 Capsella grandiflora
Cagra.1561s0004 2.0kb downstream 2.0kb downstream 6744 true Scaffold1561: 11740-18483 Capsella grandiflora
Cagra.1561s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1561: 16484-18483 Capsella grandiflora
Cagra.1561s0004 5.0kb upstream 5.0kb upstream 9744 true Scaffold1561: 6740-16483 Capsella grandiflora
Cagra.1561s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1561: 6740-11739 Capsella grandiflora
Cagra.1561s0004 5.0kb downstream 5.0kb downstream 9744 true Scaffold1561: 11740-21483 Capsella grandiflora
Cagra.1561s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1561: 16484-21483 Capsella grandiflora
Cagra.1561s0004 10.0kb upstream 10.0kb upstream 14744 true Scaffold1561: 1740-16483 Capsella grandiflora
Cagra.1561s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1561: 1740-11739 Capsella grandiflora
Cagra.1561s0004 10.0kb downstream 10.0kb downstream 14744 true Scaffold1561: 11740-26483 Capsella grandiflora
Cagra.1561s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1561: 16484-26483 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366722 5261 Brassicaceae View MSA
123833779 5264 Brassicales-Malvales View MSA
124342700 5266 SBM View MSA
124243274 5268 Malvidae View MSA
124067108 5270 Rosid View MSA
123736632 5271 Pentapetalae View MSA
122792213 5272 Eudicot View MSA
122044793 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain