Gene : Cagra.1561s0006 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12713 - VACUOLAR ATP SYNTHASE SUBUNIT G Genomic Order:  6
Name:  ? Cagra.1561s0006 Secondary Identifier:  ? PAC:28907406
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1561s0006 0.5kb upstream 0.5kb upstream 2041 true Scaffold1561: 22494-24534 Capsella grandiflora
Cagra.1561s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1561: 24035-24534 Capsella grandiflora
Cagra.1561s0006 0.5kb downstream 0.5kb downstream 2041 true Scaffold1561: 21994-24034 Capsella grandiflora
Cagra.1561s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1561: 21994-22493 Capsella grandiflora
Cagra.1561s0006 1.0kb upstream 1.0kb upstream 2541 true Scaffold1561: 22494-25034 Capsella grandiflora
Cagra.1561s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1561: 24035-25034 Capsella grandiflora
Cagra.1561s0006 1.0kb downstream 1.0kb downstream 2541 true Scaffold1561: 21494-24034 Capsella grandiflora
Cagra.1561s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1561: 21494-22493 Capsella grandiflora
Cagra.1561s0006 2.0kb upstream 2.0kb upstream 3541 true Scaffold1561: 22494-26034 Capsella grandiflora
Cagra.1561s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1561: 24035-26034 Capsella grandiflora
Cagra.1561s0006 2.0kb downstream 2.0kb downstream 3541 true Scaffold1561: 20494-24034 Capsella grandiflora
Cagra.1561s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1561: 20494-22493 Capsella grandiflora
Cagra.1561s0006 5.0kb upstream 5.0kb upstream 6541 true Scaffold1561: 22494-29034 Capsella grandiflora
Cagra.1561s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1561: 24035-29034 Capsella grandiflora
Cagra.1561s0006 5.0kb downstream 5.0kb downstream 6541 true Scaffold1561: 17494-24034 Capsella grandiflora
Cagra.1561s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1561: 17494-22493 Capsella grandiflora
Cagra.1561s0006 10.0kb upstream 10.0kb upstream 11541 true Scaffold1561: 22494-34034 Capsella grandiflora
Cagra.1561s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1561: 24035-34034 Capsella grandiflora
Cagra.1561s0006 10.0kb downstream 10.0kb downstream 11541 true Scaffold1561: 12494-24034 Capsella grandiflora
Cagra.1561s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1561: 12494-22493 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041228 5273 Angiosperm View MSA
122376644 5261 Brassicaceae View MSA
123836363 5264 Brassicales-Malvales View MSA
124350151 5266 SBM View MSA
124238118 5268 Malvidae View MSA
124071685 5270 Rosid View MSA
123752042 5271 Pentapetalae View MSA
122795974 5272 Eudicot View MSA
121344962 5274 Embryophyte View MSA
123424179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain