Gene : Cagra.1561s0022 C. grandiflora v1.1
Defline:  (1 of 3) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Genomic Order:  22
Name:  ? Cagra.1561s0022 Secondary Identifier:  ? PAC:28907445
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1561s0022 0.5kb upstream 0.5kb upstream 2530 true Scaffold1561: 93846-96375 Capsella grandiflora
Cagra.1561s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold1561: 93846-94345 Capsella grandiflora
Cagra.1561s0022 0.5kb downstream 0.5kb downstream 2530 true Scaffold1561: 94346-96875 Capsella grandiflora
Cagra.1561s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold1561: 96376-96875 Capsella grandiflora
Cagra.1561s0022 1.0kb upstream 1.0kb upstream 3030 true Scaffold1561: 93346-96375 Capsella grandiflora
Cagra.1561s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold1561: 93346-94345 Capsella grandiflora
Cagra.1561s0022 1.0kb downstream 1.0kb downstream 3030 true Scaffold1561: 94346-97375 Capsella grandiflora
Cagra.1561s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold1561: 96376-97375 Capsella grandiflora
Cagra.1561s0022 2.0kb upstream 2.0kb upstream 4030 true Scaffold1561: 92346-96375 Capsella grandiflora
Cagra.1561s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold1561: 92346-94345 Capsella grandiflora
Cagra.1561s0022 2.0kb downstream 2.0kb downstream 4030 true Scaffold1561: 94346-98375 Capsella grandiflora
Cagra.1561s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold1561: 96376-98375 Capsella grandiflora
Cagra.1561s0022 5.0kb upstream 5.0kb upstream 7030 true Scaffold1561: 89346-96375 Capsella grandiflora
Cagra.1561s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold1561: 89346-94345 Capsella grandiflora
Cagra.1561s0022 5.0kb downstream 5.0kb downstream 7030 true Scaffold1561: 94346-101375 Capsella grandiflora
Cagra.1561s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold1561: 96376-101375 Capsella grandiflora
Cagra.1561s0022 10.0kb upstream 10.0kb upstream 12030 true Scaffold1561: 84346-96375 Capsella grandiflora
Cagra.1561s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold1561: 84346-94345 Capsella grandiflora
Cagra.1561s0022 10.0kb downstream 10.0kb downstream 12030 true Scaffold1561: 94346-106375 Capsella grandiflora
Cagra.1561s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold1561: 96376-106375 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378366 5261 Brassicaceae View MSA
123829411 5264 Brassicales-Malvales View MSA
124346083 5266 SBM View MSA
124245870 5268 Malvidae View MSA
124072607 5270 Rosid View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain