Gene : Cagra.1508s0151 C. grandiflora v1.1
Defline:  (1 of 1) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase Genomic Order:  151
Name:  ? Cagra.1508s0151 Secondary Identifier:  ? PAC:28905817
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5837 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0151 0.5kb upstream 0.5kb upstream 3322 true Scaffold1508: 633396-636717 Capsella grandiflora
Cagra.1508s0151 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 636218-636717 Capsella grandiflora
Cagra.1508s0151 0.5kb downstream 0.5kb downstream 3322 true Scaffold1508: 632896-636217 Capsella grandiflora
Cagra.1508s0151 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 632896-633395 Capsella grandiflora
Cagra.1508s0151 1.0kb upstream 1.0kb upstream 3822 true Scaffold1508: 633396-637217 Capsella grandiflora
Cagra.1508s0151 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 636218-637217 Capsella grandiflora
Cagra.1508s0151 1.0kb downstream 1.0kb downstream 3822 true Scaffold1508: 632396-636217 Capsella grandiflora
Cagra.1508s0151 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 632396-633395 Capsella grandiflora
Cagra.1508s0151 2.0kb upstream 2.0kb upstream 4822 true Scaffold1508: 633396-638217 Capsella grandiflora
Cagra.1508s0151 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 636218-638217 Capsella grandiflora
Cagra.1508s0151 2.0kb downstream 2.0kb downstream 4822 true Scaffold1508: 631396-636217 Capsella grandiflora
Cagra.1508s0151 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 631396-633395 Capsella grandiflora
Cagra.1508s0151 5.0kb upstream 5.0kb upstream 7822 true Scaffold1508: 633396-641217 Capsella grandiflora
Cagra.1508s0151 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 636218-641217 Capsella grandiflora
Cagra.1508s0151 5.0kb downstream 5.0kb downstream 7822 true Scaffold1508: 628396-636217 Capsella grandiflora
Cagra.1508s0151 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 628396-633395 Capsella grandiflora
Cagra.1508s0151 10.0kb upstream 10.0kb upstream 12822 true Scaffold1508: 633396-646217 Capsella grandiflora
Cagra.1508s0151 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 636218-646217 Capsella grandiflora
Cagra.1508s0151 10.0kb downstream 10.0kb downstream 12822 true Scaffold1508: 623396-636217 Capsella grandiflora
Cagra.1508s0151 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 623396-633395 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372507 5261 Brassicaceae View MSA
123834276 5264 Brassicales-Malvales View MSA
124340453 5266 SBM View MSA
124243715 5268 Malvidae View MSA
124061989 5270 Rosid View MSA
123752148 5271 Pentapetalae View MSA
122787718 5272 Eudicot View MSA
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain