Gene : Cagra.1508s0160 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12634:SF17 - SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN Genomic Order:  160
Name:  ? Cagra.1508s0160 Secondary Identifier:  ? PAC:28905796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0160 0.5kb upstream 0.5kb upstream 7665 true Scaffold1508: 662725-670389 Capsella grandiflora
Cagra.1508s0160 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 669890-670389 Capsella grandiflora
Cagra.1508s0160 0.5kb downstream 0.5kb downstream 7665 true Scaffold1508: 662225-669889 Capsella grandiflora
Cagra.1508s0160 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 662225-662724 Capsella grandiflora
Cagra.1508s0160 1.0kb upstream 1.0kb upstream 8165 true Scaffold1508: 662725-670889 Capsella grandiflora
Cagra.1508s0160 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 669890-670889 Capsella grandiflora
Cagra.1508s0160 1.0kb downstream 1.0kb downstream 8165 true Scaffold1508: 661725-669889 Capsella grandiflora
Cagra.1508s0160 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 661725-662724 Capsella grandiflora
Cagra.1508s0160 2.0kb upstream 2.0kb upstream 9165 true Scaffold1508: 662725-671889 Capsella grandiflora
Cagra.1508s0160 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 669890-671889 Capsella grandiflora
Cagra.1508s0160 2.0kb downstream 2.0kb downstream 9165 true Scaffold1508: 660725-669889 Capsella grandiflora
Cagra.1508s0160 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 660725-662724 Capsella grandiflora
Cagra.1508s0160 5.0kb upstream 5.0kb upstream 12165 true Scaffold1508: 662725-674889 Capsella grandiflora
Cagra.1508s0160 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 669890-674889 Capsella grandiflora
Cagra.1508s0160 5.0kb downstream 5.0kb downstream 12165 true Scaffold1508: 657725-669889 Capsella grandiflora
Cagra.1508s0160 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 657725-662724 Capsella grandiflora
Cagra.1508s0160 10.0kb upstream 10.0kb upstream 17165 true Scaffold1508: 662725-679889 Capsella grandiflora
Cagra.1508s0160 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 669890-679889 Capsella grandiflora
Cagra.1508s0160 10.0kb downstream 10.0kb downstream 17165 true Scaffold1508: 652725-669889 Capsella grandiflora
Cagra.1508s0160 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 652725-662724 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378483 5261 Brassicaceae View MSA
123836833 5264 Brassicales-Malvales View MSA
124346831 5266 SBM View MSA
124246856 5268 Malvidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain