Gene : Cagra.1508s0165 C. grandiflora v1.1
Defline:  (1 of 21) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  165
Name:  ? Cagra.1508s0165 Secondary Identifier:  ? PAC:28905733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0165 0.5kb upstream 0.5kb upstream 3867 true Scaffold1508: 692952-696818 Capsella grandiflora
Cagra.1508s0165 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 696319-696818 Capsella grandiflora
Cagra.1508s0165 0.5kb downstream 0.5kb downstream 3867 true Scaffold1508: 692452-696318 Capsella grandiflora
Cagra.1508s0165 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 692452-692951 Capsella grandiflora
Cagra.1508s0165 1.0kb upstream 1.0kb upstream 4367 true Scaffold1508: 692952-697318 Capsella grandiflora
Cagra.1508s0165 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 696319-697318 Capsella grandiflora
Cagra.1508s0165 1.0kb downstream 1.0kb downstream 4367 true Scaffold1508: 691952-696318 Capsella grandiflora
Cagra.1508s0165 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 691952-692951 Capsella grandiflora
Cagra.1508s0165 2.0kb upstream 2.0kb upstream 5367 true Scaffold1508: 692952-698318 Capsella grandiflora
Cagra.1508s0165 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 696319-698318 Capsella grandiflora
Cagra.1508s0165 2.0kb downstream 2.0kb downstream 5367 true Scaffold1508: 690952-696318 Capsella grandiflora
Cagra.1508s0165 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 690952-692951 Capsella grandiflora
Cagra.1508s0165 5.0kb upstream 5.0kb upstream 8367 true Scaffold1508: 692952-701318 Capsella grandiflora
Cagra.1508s0165 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 696319-701318 Capsella grandiflora
Cagra.1508s0165 5.0kb downstream 5.0kb downstream 8367 true Scaffold1508: 687952-696318 Capsella grandiflora
Cagra.1508s0165 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 687952-692951 Capsella grandiflora
Cagra.1508s0165 10.0kb upstream 10.0kb upstream 13367 true Scaffold1508: 692952-706318 Capsella grandiflora
Cagra.1508s0165 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 696319-706318 Capsella grandiflora
Cagra.1508s0165 10.0kb downstream 10.0kb downstream 13367 true Scaffold1508: 682952-696318 Capsella grandiflora
Cagra.1508s0165 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 682952-692951 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375023 5261 Brassicaceae View MSA
123831195 5264 Brassicales-Malvales View MSA
124340124 5266 SBM View MSA
124238974 5268 Malvidae View MSA
124066355 5270 Rosid View MSA
123740416 5271 Pentapetalae View MSA
122793114 5272 Eudicot View MSA
122046069 5273 Angiosperm View MSA
121347106 5274 Embryophyte View MSA
123380493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain