Gene : Cagra.1508s0170 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13018:SF22 - EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  170
Name:  ? Cagra.1508s0170 Secondary Identifier:  ? PAC:28905827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0170 0.5kb upstream 0.5kb upstream 3820 true Scaffold1508: 726895-730714 Capsella grandiflora
Cagra.1508s0170 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 730215-730714 Capsella grandiflora
Cagra.1508s0170 0.5kb downstream 0.5kb downstream 3820 true Scaffold1508: 726395-730214 Capsella grandiflora
Cagra.1508s0170 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 726395-726894 Capsella grandiflora
Cagra.1508s0170 1.0kb upstream 1.0kb upstream 4320 true Scaffold1508: 726895-731214 Capsella grandiflora
Cagra.1508s0170 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 730215-731214 Capsella grandiflora
Cagra.1508s0170 1.0kb downstream 1.0kb downstream 4320 true Scaffold1508: 725895-730214 Capsella grandiflora
Cagra.1508s0170 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 725895-726894 Capsella grandiflora
Cagra.1508s0170 2.0kb upstream 2.0kb upstream 5320 true Scaffold1508: 726895-732214 Capsella grandiflora
Cagra.1508s0170 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 730215-732214 Capsella grandiflora
Cagra.1508s0170 2.0kb downstream 2.0kb downstream 5320 true Scaffold1508: 724895-730214 Capsella grandiflora
Cagra.1508s0170 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 724895-726894 Capsella grandiflora
Cagra.1508s0170 5.0kb upstream 5.0kb upstream 8320 true Scaffold1508: 726895-735214 Capsella grandiflora
Cagra.1508s0170 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 730215-735214 Capsella grandiflora
Cagra.1508s0170 5.0kb downstream 5.0kb downstream 8320 true Scaffold1508: 721895-730214 Capsella grandiflora
Cagra.1508s0170 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 721895-726894 Capsella grandiflora
Cagra.1508s0170 10.0kb upstream 10.0kb upstream 13320 true Scaffold1508: 726895-740214 Capsella grandiflora
Cagra.1508s0170 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 730215-740214 Capsella grandiflora
Cagra.1508s0170 10.0kb downstream 10.0kb downstream 13320 true Scaffold1508: 716895-730214 Capsella grandiflora
Cagra.1508s0170 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 716895-726894 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373212 5261 Brassicaceae View MSA
123836481 5264 Brassicales-Malvales View MSA
124342492 5266 SBM View MSA
124245237 5268 Malvidae View MSA
124065174 5270 Rosid View MSA
123736391 5271 Pentapetalae View MSA
122785693 5272 Eudicot View MSA
122045968 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121348533 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain