Gene : Cagra.1508s0171 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31384:SF3 - AUXIN RESPONSE FACTOR 6 Genomic Order:  171
Name:  ? Cagra.1508s0171 Secondary Identifier:  ? PAC:28905696
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0171 0.5kb upstream 0.5kb upstream 5434 true Scaffold1508: 747985-753418 Capsella grandiflora
Cagra.1508s0171 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 747985-748484 Capsella grandiflora
Cagra.1508s0171 0.5kb downstream 0.5kb downstream 5434 true Scaffold1508: 748485-753918 Capsella grandiflora
Cagra.1508s0171 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 753419-753918 Capsella grandiflora
Cagra.1508s0171 1.0kb upstream 1.0kb upstream 5934 true Scaffold1508: 747485-753418 Capsella grandiflora
Cagra.1508s0171 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 747485-748484 Capsella grandiflora
Cagra.1508s0171 1.0kb downstream 1.0kb downstream 5934 true Scaffold1508: 748485-754418 Capsella grandiflora
Cagra.1508s0171 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 753419-754418 Capsella grandiflora
Cagra.1508s0171 2.0kb upstream 2.0kb upstream 6934 true Scaffold1508: 746485-753418 Capsella grandiflora
Cagra.1508s0171 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 746485-748484 Capsella grandiflora
Cagra.1508s0171 2.0kb downstream 2.0kb downstream 6934 true Scaffold1508: 748485-755418 Capsella grandiflora
Cagra.1508s0171 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 753419-755418 Capsella grandiflora
Cagra.1508s0171 5.0kb upstream 5.0kb upstream 9934 true Scaffold1508: 743485-753418 Capsella grandiflora
Cagra.1508s0171 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 743485-748484 Capsella grandiflora
Cagra.1508s0171 5.0kb downstream 5.0kb downstream 9934 true Scaffold1508: 748485-758418 Capsella grandiflora
Cagra.1508s0171 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 753419-758418 Capsella grandiflora
Cagra.1508s0171 10.0kb upstream 10.0kb upstream 14934 true Scaffold1508: 738485-753418 Capsella grandiflora
Cagra.1508s0171 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 738485-748484 Capsella grandiflora
Cagra.1508s0171 10.0kb downstream 10.0kb downstream 14934 true Scaffold1508: 748485-763418 Capsella grandiflora
Cagra.1508s0171 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 753419-763418 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373251 5261 Brassicaceae View MSA
123836478 5264 Brassicales-Malvales View MSA
124348763 5266 SBM View MSA
124245214 5268 Malvidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain