Gene : Cagra.1511s0004 C. grandiflora v1.1
Defline:  (1 of 12) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  4
Name:  ? Cagra.1511s0004 Secondary Identifier:  ? PAC:28901368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1511s0004 0.5kb upstream 0.5kb upstream 2737 true Scaffold1511: 7187-9923 Capsella grandiflora
Cagra.1511s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1511: 9424-9923 Capsella grandiflora
Cagra.1511s0004 0.5kb downstream 0.5kb downstream 2737 true Scaffold1511: 6687-9423 Capsella grandiflora
Cagra.1511s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1511: 6687-7186 Capsella grandiflora
Cagra.1511s0004 1.0kb upstream 1.0kb upstream 3237 true Scaffold1511: 7187-10423 Capsella grandiflora
Cagra.1511s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1511: 9424-10423 Capsella grandiflora
Cagra.1511s0004 1.0kb downstream 1.0kb downstream 3237 true Scaffold1511: 6187-9423 Capsella grandiflora
Cagra.1511s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1511: 6187-7186 Capsella grandiflora
Cagra.1511s0004 2.0kb upstream 2.0kb upstream 4237 true Scaffold1511: 7187-11423 Capsella grandiflora
Cagra.1511s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1511: 9424-11423 Capsella grandiflora
Cagra.1511s0004 2.0kb downstream 2.0kb downstream 4237 true Scaffold1511: 5187-9423 Capsella grandiflora
Cagra.1511s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1511: 5187-7186 Capsella grandiflora
Cagra.1511s0004 5.0kb upstream 5.0kb upstream 7237 true Scaffold1511: 7187-14423 Capsella grandiflora
Cagra.1511s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1511: 9424-14423 Capsella grandiflora
Cagra.1511s0004 5.0kb downstream 5.0kb downstream 7237 true Scaffold1511: 2187-9423 Capsella grandiflora
Cagra.1511s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1511: 2187-7186 Capsella grandiflora
Cagra.1511s0004 10.0kb upstream 10.0kb upstream 12237 true Scaffold1511: 7187-19423 Capsella grandiflora
Cagra.1511s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1511: 9424-19423 Capsella grandiflora
Cagra.1511s0004 10.0kb downstream 10.0kb downstream 9423 true Scaffold1511: 1-9423 Capsella grandiflora
Cagra.1511s0004 10.0kb downstream 10.0kb downstream 7186 false Scaffold1511: 1-7186 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363845 5261 Brassicaceae View MSA
123832579 5264 Brassicales-Malvales View MSA
124341598 5266 SBM View MSA
124253990 5268 Malvidae View MSA
124061924 5270 Rosid View MSA
123753707 5271 Pentapetalae View MSA
122796758 5272 Eudicot View MSA
122043309 5273 Angiosperm View MSA
121349929 5274 Embryophyte View MSA
123381506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain