Gene : Cagra.1517s0028 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14217:SF1 - INOSITOL-TETRAKISPHOSPHATE 1-KINASE Genomic Order:  28
Name:  ? Cagra.1517s0028 Secondary Identifier:  ? PAC:28899356
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6365 Capsella grandiflora pathologic  
Cgrandiflora PWY-6366 Capsella grandiflora pathologic  
Cgrandiflora PWY-6554 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1517s0028 0.5kb upstream 0.5kb upstream 3641 true Scaffold1517: 82938-86578 Capsella grandiflora
Cagra.1517s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold1517: 86079-86578 Capsella grandiflora
Cagra.1517s0028 0.5kb downstream 0.5kb downstream 3641 true Scaffold1517: 82438-86078 Capsella grandiflora
Cagra.1517s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold1517: 82438-82937 Capsella grandiflora
Cagra.1517s0028 1.0kb upstream 1.0kb upstream 4141 true Scaffold1517: 82938-87078 Capsella grandiflora
Cagra.1517s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold1517: 86079-87078 Capsella grandiflora
Cagra.1517s0028 1.0kb downstream 1.0kb downstream 4141 true Scaffold1517: 81938-86078 Capsella grandiflora
Cagra.1517s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold1517: 81938-82937 Capsella grandiflora
Cagra.1517s0028 2.0kb upstream 2.0kb upstream 5141 true Scaffold1517: 82938-88078 Capsella grandiflora
Cagra.1517s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold1517: 86079-88078 Capsella grandiflora
Cagra.1517s0028 2.0kb downstream 2.0kb downstream 5141 true Scaffold1517: 80938-86078 Capsella grandiflora
Cagra.1517s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold1517: 80938-82937 Capsella grandiflora
Cagra.1517s0028 5.0kb upstream 5.0kb upstream 8141 true Scaffold1517: 82938-91078 Capsella grandiflora
Cagra.1517s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold1517: 86079-91078 Capsella grandiflora
Cagra.1517s0028 5.0kb downstream 5.0kb downstream 8141 true Scaffold1517: 77938-86078 Capsella grandiflora
Cagra.1517s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold1517: 77938-82937 Capsella grandiflora
Cagra.1517s0028 10.0kb upstream 10.0kb upstream 13141 true Scaffold1517: 82938-96078 Capsella grandiflora
Cagra.1517s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold1517: 86079-96078 Capsella grandiflora
Cagra.1517s0028 10.0kb downstream 10.0kb downstream 13141 true Scaffold1517: 72938-86078 Capsella grandiflora
Cagra.1517s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold1517: 72938-82937 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369178 5261 Brassicaceae View MSA
123831358 5264 Brassicales-Malvales View MSA
124343367 5266 SBM View MSA
124239106 5268 Malvidae View MSA
124062459 5270 Rosid View MSA
123738730 5271 Pentapetalae View MSA
122785749 5272 Eudicot View MSA
122045503 5273 Angiosperm View MSA
121345915 5274 Embryophyte View MSA
123428316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain