Gene : Cagra.1517s0044 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22884//PTHR22884:SF362 - SET DOMAIN PROTEINS Genomic Order:  44
Name:  ? Cagra.1517s0044 Secondary Identifier:  ? PAC:28899359
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1517s0044 0.5kb upstream 0.5kb upstream 3214 true Scaffold1517: 129796-133009 Capsella grandiflora
Cagra.1517s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold1517: 129796-130295 Capsella grandiflora
Cagra.1517s0044 0.5kb downstream 0.5kb downstream 3214 true Scaffold1517: 130296-133509 Capsella grandiflora
Cagra.1517s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold1517: 133010-133509 Capsella grandiflora
Cagra.1517s0044 1.0kb upstream 1.0kb upstream 3714 true Scaffold1517: 129296-133009 Capsella grandiflora
Cagra.1517s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold1517: 129296-130295 Capsella grandiflora
Cagra.1517s0044 1.0kb downstream 1.0kb downstream 3714 true Scaffold1517: 130296-134009 Capsella grandiflora
Cagra.1517s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold1517: 133010-134009 Capsella grandiflora
Cagra.1517s0044 2.0kb upstream 2.0kb upstream 4714 true Scaffold1517: 128296-133009 Capsella grandiflora
Cagra.1517s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold1517: 128296-130295 Capsella grandiflora
Cagra.1517s0044 2.0kb downstream 2.0kb downstream 4714 true Scaffold1517: 130296-135009 Capsella grandiflora
Cagra.1517s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold1517: 133010-135009 Capsella grandiflora
Cagra.1517s0044 5.0kb upstream 5.0kb upstream 7714 true Scaffold1517: 125296-133009 Capsella grandiflora
Cagra.1517s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold1517: 125296-130295 Capsella grandiflora
Cagra.1517s0044 5.0kb downstream 5.0kb downstream 7714 true Scaffold1517: 130296-138009 Capsella grandiflora
Cagra.1517s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold1517: 133010-138009 Capsella grandiflora
Cagra.1517s0044 10.0kb upstream 10.0kb upstream 12714 true Scaffold1517: 120296-133009 Capsella grandiflora
Cagra.1517s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold1517: 120296-130295 Capsella grandiflora
Cagra.1517s0044 10.0kb downstream 10.0kb downstream 11993 true Scaffold1517: 130296-142288 Capsella grandiflora
Cagra.1517s0044 10.0kb downstream 10.0kb downstream 9279 false Scaffold1517: 133010-142288 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373498 5261 Brassicaceae View MSA
123835836 5264 Brassicales-Malvales View MSA
124340334 5266 SBM View MSA
124245007 5268 Malvidae View MSA
124064524 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain