Gene : Cagra.1725s0076 C. grandiflora v1.1
Defline:  (1 of 7) PTHR24093:SF355 - ATPASE 1, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  76
Name:  ? Cagra.1725s0076 Secondary Identifier:  ? PAC:28896122
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0076 0.5kb upstream 0.5kb upstream 4287 true Scaffold1725: 288862-293148 Capsella grandiflora
Cagra.1725s0076 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 288862-289361 Capsella grandiflora
Cagra.1725s0076 0.5kb downstream 0.5kb downstream 4287 true Scaffold1725: 289362-293648 Capsella grandiflora
Cagra.1725s0076 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 293149-293648 Capsella grandiflora
Cagra.1725s0076 1.0kb upstream 1.0kb upstream 4787 true Scaffold1725: 288362-293148 Capsella grandiflora
Cagra.1725s0076 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 288362-289361 Capsella grandiflora
Cagra.1725s0076 1.0kb downstream 1.0kb downstream 4787 true Scaffold1725: 289362-294148 Capsella grandiflora
Cagra.1725s0076 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 293149-294148 Capsella grandiflora
Cagra.1725s0076 2.0kb upstream 2.0kb upstream 5787 true Scaffold1725: 287362-293148 Capsella grandiflora
Cagra.1725s0076 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 287362-289361 Capsella grandiflora
Cagra.1725s0076 2.0kb downstream 2.0kb downstream 5787 true Scaffold1725: 289362-295148 Capsella grandiflora
Cagra.1725s0076 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 293149-295148 Capsella grandiflora
Cagra.1725s0076 5.0kb upstream 5.0kb upstream 8787 true Scaffold1725: 284362-293148 Capsella grandiflora
Cagra.1725s0076 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 284362-289361 Capsella grandiflora
Cagra.1725s0076 5.0kb downstream 5.0kb downstream 8787 true Scaffold1725: 289362-298148 Capsella grandiflora
Cagra.1725s0076 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 293149-298148 Capsella grandiflora
Cagra.1725s0076 10.0kb upstream 10.0kb upstream 13787 true Scaffold1725: 279362-293148 Capsella grandiflora
Cagra.1725s0076 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 279362-289361 Capsella grandiflora
Cagra.1725s0076 10.0kb downstream 10.0kb downstream 13787 true Scaffold1725: 289362-303148 Capsella grandiflora
Cagra.1725s0076 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 293149-303148 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375374 5261 Brassicaceae View MSA
123835277 5264 Brassicales-Malvales View MSA
124339261 5266 SBM View MSA
124250534 5268 Malvidae View MSA
124070972 5270 Rosid View MSA
123741825 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain