Gene : Cagra.1725s0074 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Genomic Order:  74
Name:  ? Cagra.1725s0074 Secondary Identifier:  ? PAC:28896102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0074 0.5kb upstream 0.5kb upstream 5472 true Scaffold1725: 280484-285955 Capsella grandiflora
Cagra.1725s0074 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 285456-285955 Capsella grandiflora
Cagra.1725s0074 0.5kb downstream 0.5kb downstream 5472 true Scaffold1725: 279984-285455 Capsella grandiflora
Cagra.1725s0074 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 279984-280483 Capsella grandiflora
Cagra.1725s0074 1.0kb upstream 1.0kb upstream 5972 true Scaffold1725: 280484-286455 Capsella grandiflora
Cagra.1725s0074 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 285456-286455 Capsella grandiflora
Cagra.1725s0074 1.0kb downstream 1.0kb downstream 5972 true Scaffold1725: 279484-285455 Capsella grandiflora
Cagra.1725s0074 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 279484-280483 Capsella grandiflora
Cagra.1725s0074 2.0kb upstream 2.0kb upstream 6972 true Scaffold1725: 280484-287455 Capsella grandiflora
Cagra.1725s0074 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 285456-287455 Capsella grandiflora
Cagra.1725s0074 2.0kb downstream 2.0kb downstream 6972 true Scaffold1725: 278484-285455 Capsella grandiflora
Cagra.1725s0074 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 278484-280483 Capsella grandiflora
Cagra.1725s0074 5.0kb upstream 5.0kb upstream 9972 true Scaffold1725: 280484-290455 Capsella grandiflora
Cagra.1725s0074 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 285456-290455 Capsella grandiflora
Cagra.1725s0074 5.0kb downstream 5.0kb downstream 9972 true Scaffold1725: 275484-285455 Capsella grandiflora
Cagra.1725s0074 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 275484-280483 Capsella grandiflora
Cagra.1725s0074 10.0kb upstream 10.0kb upstream 14972 true Scaffold1725: 280484-295455 Capsella grandiflora
Cagra.1725s0074 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 285456-295455 Capsella grandiflora
Cagra.1725s0074 10.0kb downstream 10.0kb downstream 14972 true Scaffold1725: 270484-285455 Capsella grandiflora
Cagra.1725s0074 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 270484-280483 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360570 5261 Brassicaceae View MSA
123833721 5264 Brassicales-Malvales View MSA
124337960 5266 SBM View MSA
124238103 5268 Malvidae View MSA
124062118 5270 Rosid View MSA
123738828 5271 Pentapetalae View MSA
122786921 5272 Eudicot View MSA
122043247 5273 Angiosperm View MSA
121310093 5274 Embryophyte View MSA
123347679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain