Gene : Cagra.1725s0093 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Genomic Order:  93
Name:  ? Cagra.1725s0093 Secondary Identifier:  ? PAC:28896121
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0093 0.5kb upstream 0.5kb upstream 6818 true Scaffold1725: 350861-357678 Capsella grandiflora
Cagra.1725s0093 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 350861-351360 Capsella grandiflora
Cagra.1725s0093 0.5kb downstream 0.5kb downstream 6818 true Scaffold1725: 351361-358178 Capsella grandiflora
Cagra.1725s0093 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 357679-358178 Capsella grandiflora
Cagra.1725s0093 1.0kb upstream 1.0kb upstream 7318 true Scaffold1725: 350361-357678 Capsella grandiflora
Cagra.1725s0093 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 350361-351360 Capsella grandiflora
Cagra.1725s0093 1.0kb downstream 1.0kb downstream 7318 true Scaffold1725: 351361-358678 Capsella grandiflora
Cagra.1725s0093 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 357679-358678 Capsella grandiflora
Cagra.1725s0093 2.0kb upstream 2.0kb upstream 8318 true Scaffold1725: 349361-357678 Capsella grandiflora
Cagra.1725s0093 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 349361-351360 Capsella grandiflora
Cagra.1725s0093 2.0kb downstream 2.0kb downstream 8318 true Scaffold1725: 351361-359678 Capsella grandiflora
Cagra.1725s0093 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 357679-359678 Capsella grandiflora
Cagra.1725s0093 5.0kb upstream 5.0kb upstream 11318 true Scaffold1725: 346361-357678 Capsella grandiflora
Cagra.1725s0093 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 346361-351360 Capsella grandiflora
Cagra.1725s0093 5.0kb downstream 5.0kb downstream 11318 true Scaffold1725: 351361-362678 Capsella grandiflora
Cagra.1725s0093 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 357679-362678 Capsella grandiflora
Cagra.1725s0093 10.0kb upstream 10.0kb upstream 16318 true Scaffold1725: 341361-357678 Capsella grandiflora
Cagra.1725s0093 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 341361-351360 Capsella grandiflora
Cagra.1725s0093 10.0kb downstream 10.0kb downstream 16318 true Scaffold1725: 351361-367678 Capsella grandiflora
Cagra.1725s0093 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 357679-367678 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375135 5261 Brassicaceae View MSA
123800888 5264 Brassicales-Malvales View MSA
124298248 5266 SBM View MSA
124249364 5268 Malvidae View MSA
124063339 5270 Rosid View MSA
123747741 5271 Pentapetalae View MSA
122790823 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain