Gene : Cagra.1725s0101 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11370 - DNA-REPAIR PROTEIN XRCC1 Genomic Order:  101
Name:  ? Cagra.1725s0101 Secondary Identifier:  ? PAC:28896091
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0101 0.5kb upstream 0.5kb upstream 3337 true Scaffold1725: 382227-385563 Capsella grandiflora
Cagra.1725s0101 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 382227-382726 Capsella grandiflora
Cagra.1725s0101 0.5kb downstream 0.5kb downstream 3337 true Scaffold1725: 382727-386063 Capsella grandiflora
Cagra.1725s0101 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 385564-386063 Capsella grandiflora
Cagra.1725s0101 1.0kb upstream 1.0kb upstream 3837 true Scaffold1725: 381727-385563 Capsella grandiflora
Cagra.1725s0101 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 381727-382726 Capsella grandiflora
Cagra.1725s0101 1.0kb downstream 1.0kb downstream 3837 true Scaffold1725: 382727-386563 Capsella grandiflora
Cagra.1725s0101 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 385564-386563 Capsella grandiflora
Cagra.1725s0101 2.0kb upstream 2.0kb upstream 4837 true Scaffold1725: 380727-385563 Capsella grandiflora
Cagra.1725s0101 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 380727-382726 Capsella grandiflora
Cagra.1725s0101 2.0kb downstream 2.0kb downstream 4837 true Scaffold1725: 382727-387563 Capsella grandiflora
Cagra.1725s0101 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 385564-387563 Capsella grandiflora
Cagra.1725s0101 5.0kb upstream 5.0kb upstream 7837 true Scaffold1725: 377727-385563 Capsella grandiflora
Cagra.1725s0101 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 377727-382726 Capsella grandiflora
Cagra.1725s0101 5.0kb downstream 5.0kb downstream 7837 true Scaffold1725: 382727-390563 Capsella grandiflora
Cagra.1725s0101 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 385564-390563 Capsella grandiflora
Cagra.1725s0101 10.0kb upstream 10.0kb upstream 12837 true Scaffold1725: 372727-385563 Capsella grandiflora
Cagra.1725s0101 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 372727-382726 Capsella grandiflora
Cagra.1725s0101 10.0kb downstream 10.0kb downstream 12837 true Scaffold1725: 382727-395563 Capsella grandiflora
Cagra.1725s0101 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 385564-395563 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374644 5261 Brassicaceae View MSA
123834439 5264 Brassicales-Malvales View MSA
124342643 5266 SBM View MSA
124244372 5268 Malvidae View MSA
124064277 5270 Rosid View MSA
123745081 5271 Pentapetalae View MSA
122790473 5272 Eudicot View MSA
122046298 5273 Angiosperm View MSA
121347821 5274 Embryophyte View MSA
123380641 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain