Gene : Cagra.1725s0114 C. grandiflora v1.1
Defline:  (1 of 361) PF01535 - PPR repeat (PPR) Genomic Order:  114
Name:  ? Cagra.1725s0114 Secondary Identifier:  ? PAC:28896143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0114 0.5kb upstream 0.5kb upstream 3002 true Scaffold1725: 432942-435943 Capsella grandiflora
Cagra.1725s0114 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 435444-435943 Capsella grandiflora
Cagra.1725s0114 0.5kb downstream 0.5kb downstream 3002 true Scaffold1725: 432442-435443 Capsella grandiflora
Cagra.1725s0114 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 432442-432941 Capsella grandiflora
Cagra.1725s0114 1.0kb upstream 1.0kb upstream 3502 true Scaffold1725: 432942-436443 Capsella grandiflora
Cagra.1725s0114 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 435444-436443 Capsella grandiflora
Cagra.1725s0114 1.0kb downstream 1.0kb downstream 3502 true Scaffold1725: 431942-435443 Capsella grandiflora
Cagra.1725s0114 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 431942-432941 Capsella grandiflora
Cagra.1725s0114 2.0kb upstream 2.0kb upstream 4502 true Scaffold1725: 432942-437443 Capsella grandiflora
Cagra.1725s0114 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 435444-437443 Capsella grandiflora
Cagra.1725s0114 2.0kb downstream 2.0kb downstream 4502 true Scaffold1725: 430942-435443 Capsella grandiflora
Cagra.1725s0114 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 430942-432941 Capsella grandiflora
Cagra.1725s0114 5.0kb upstream 5.0kb upstream 7502 true Scaffold1725: 432942-440443 Capsella grandiflora
Cagra.1725s0114 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 435444-440443 Capsella grandiflora
Cagra.1725s0114 5.0kb downstream 5.0kb downstream 7502 true Scaffold1725: 427942-435443 Capsella grandiflora
Cagra.1725s0114 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 427942-432941 Capsella grandiflora
Cagra.1725s0114 10.0kb upstream 10.0kb upstream 12502 true Scaffold1725: 432942-445443 Capsella grandiflora
Cagra.1725s0114 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 435444-445443 Capsella grandiflora
Cagra.1725s0114 10.0kb downstream 10.0kb downstream 12502 true Scaffold1725: 422942-435443 Capsella grandiflora
Cagra.1725s0114 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 422942-432941 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363494 5261 Brassicaceae View MSA
123838872 5264 Brassicales-Malvales View MSA
124337336 5266 SBM View MSA
124238154 5268 Malvidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain