Gene : Cagra.1725s0144 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24075:SF0 - TRANSLOCATION PROTEIN SEC63 HOMOLOG Genomic Order:  144
Name:  ? Cagra.1725s0144 Secondary Identifier:  ? PAC:28896176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0144 0.5kb upstream 0.5kb upstream 3346 true Scaffold1725: 525674-529019 Capsella grandiflora
Cagra.1725s0144 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 528520-529019 Capsella grandiflora
Cagra.1725s0144 0.5kb downstream 0.5kb downstream 3346 true Scaffold1725: 525174-528519 Capsella grandiflora
Cagra.1725s0144 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 525174-525673 Capsella grandiflora
Cagra.1725s0144 1.0kb upstream 1.0kb upstream 3846 true Scaffold1725: 525674-529519 Capsella grandiflora
Cagra.1725s0144 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 528520-529519 Capsella grandiflora
Cagra.1725s0144 1.0kb downstream 1.0kb downstream 3846 true Scaffold1725: 524674-528519 Capsella grandiflora
Cagra.1725s0144 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 524674-525673 Capsella grandiflora
Cagra.1725s0144 2.0kb upstream 2.0kb upstream 4846 true Scaffold1725: 525674-530519 Capsella grandiflora
Cagra.1725s0144 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 528520-530519 Capsella grandiflora
Cagra.1725s0144 2.0kb downstream 2.0kb downstream 4846 true Scaffold1725: 523674-528519 Capsella grandiflora
Cagra.1725s0144 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 523674-525673 Capsella grandiflora
Cagra.1725s0144 5.0kb upstream 5.0kb upstream 7846 true Scaffold1725: 525674-533519 Capsella grandiflora
Cagra.1725s0144 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 528520-533519 Capsella grandiflora
Cagra.1725s0144 5.0kb downstream 5.0kb downstream 7846 true Scaffold1725: 520674-528519 Capsella grandiflora
Cagra.1725s0144 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 520674-525673 Capsella grandiflora
Cagra.1725s0144 10.0kb upstream 10.0kb upstream 7866 true Scaffold1725: 525674-533539 Capsella grandiflora
Cagra.1725s0144 10.0kb upstream 10.0kb upstream 5020 false Scaffold1725: 528520-533539 Capsella grandiflora
Cagra.1725s0144 10.0kb downstream 10.0kb downstream 12846 true Scaffold1725: 515674-528519 Capsella grandiflora
Cagra.1725s0144 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 515674-525673 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332846 5261 Brassicaceae Singleton cluster - no MSA
123841954 5264 Brassicales-Malvales View MSA
124323142 5266 SBM View MSA
124169342 5268 Malvidae View MSA
123892370 5270 Rosid View MSA
123750778 5271 Pentapetalae View MSA
122790438 5272 Eudicot View MSA
122042365 5273 Angiosperm View MSA
121347145 5274 Embryophyte View MSA
123426630 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain